RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 PGBD5Q8N414 524 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 ART4Q93070 314 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 SCRN2Q96FV2 425 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 SCARF2Q96GP6 870 aaPredicted RBP14.05□□□□□ -0.16
CDR2-204ENST00000564542 OR2M4Q96R27 311 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 MCCC1Q96RQ3 725 aaPredicted RBP14.05□□□□□ -0.16
CDR2-204ENST00000564542 TRIM7Q9C029 511 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 KCNK4Q9NYG8 393 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 TUBD1Q9UJT1 453 aa14.05□□□□□ -0.16
CDR2-204ENST00000564542 B4E171 279 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 H3BRJ5 948 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 PGLSO95336 258 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 SOD1P00441 154 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 TSPAN7P41732 249 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 GPR1P46091 355 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 FASLGP48023 281 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 POLE2P56282 527 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 SRSF1Q07955 248 aaKnown RBP eCLIP14.04□□□□□ -0.166e-7■■□□□ 12.2
CDR2-204ENST00000564542 KCNAB2Q13303 367 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 DPYSL2Q16555 572 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 COLEC12Q5KU26 742 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 DCAF12Q5T6F0 453 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 TMEM71Q6P5X7 295 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 DOK6Q6PKX4 331 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 TMCO3Q6UWJ1 677 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 ADAMTSL4Q6UY14 1074 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 APTXQ7Z2E3 356 aaKnown RBP14.04□□□□□ -0.16
CDR2-204ENST00000564542 TECPR1Q7Z6L1 1165 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 TSPAN33Q86UF1 283 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 FAM129CQ86XR2 697 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 CACNA2D3Q8IZS8 1091 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 ZNF564Q8TBZ8 553 aaPredicted RBP14.04□□□□□ -0.16
CDR2-204ENST00000564542 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 SLC39A1Q9NY26 324 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 TMEM9Q9P0T7 183 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 MYO6Q9UM54 1294 aa14.04□□□□□ -0.16
CDR2-204ENST00000564542 ZNF891A8MT65 544 aaPredicted RBP14.03□□□□□ -0.16
CDR2-204ENST00000564542 CAPN5O15484 640 aaPredicted RBP14.03□□□□□ -0.16
CDR2-204ENST00000564542 DUX1O43812 170 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 RAD1O60671 282 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 MAFKO60675 156 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 MPSTP25325 297 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 PCK1P35558 622 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 ARL4AP40617 200 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 MAXP61244 160 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 LRP8Q14114 963 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 ARMC12Q5T9G4 340 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 ATPAF2Q8N5M1 289 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 BMPERQ8N8U9 685 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 CATSPER2Q96P56 530 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
CDR2-204ENST00000564542 OCIAD1Q9NX40 245 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 PDP2Q9P2J9 529 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 PPIL1Q9Y3C6 166 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 PLEKHM1Q9Y4G2 1056 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
CDR2-204ENST00000564542 ZFC3H1O60293 1989 aaKnown RBP14.03□□□□□ -0.16
CDR2-204ENST00000564542 EFCAB7A8K855 629 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 PYGLP06737 847 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 GZMAP12544 262 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 CTPS1P17812 591 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
CDR2-204ENST00000564542 MMP13P45452 471 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 CCR10P46092 362 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 CDH6P55285 790 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 PTPRRQ15256 657 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 SMTNL2Q2TAL5 461 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 PYCR3Q53H96 274 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 MARC1Q5VT66 337 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 ANKS6Q68DC2 871 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 ZNF765Q7L2R6 523 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 POLNQ7Z5Q5 900 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 GALNT13Q8IUC8 556 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 SFRP1Q8N474 314 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 OR10G6Q8NH81 332 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 SLC37A2Q8TED4 501 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 NSMCE1Q8WV22 266 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 PIH1D2Q8WWB5 315 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 AP2M1Q96CW1 435 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 AHCYL2Q96HN2 611 aaKnown RBP14.02□□□□□ -0.17
CDR2-204ENST00000564542 CSPG4P5Q96PW8 444 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 EPN3Q9H201 632 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 HSD3B7Q9H2F3 369 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDR2-204ENST00000564542 ETNK2Q9NVF9 386 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 ANO10Q9NW15 660 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 CNOT8Q9UFF9 292 aaKnown RBP14.02□□□□□ -0.17
CDR2-204ENST00000564542 CD84Q9UIB8 345 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 PILRAQ9UKJ1 303 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 TMEM98Q9Y2Y6 226 aa14.02□□□□□ -0.17
CDR2-204ENST00000564542 LRRC53A6NM62 1247 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 FZD6O60353 706 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 FTLP02792 175 aaPredicted RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 ZNF30P17039 623 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 AMPD1P23109 780 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 IL1R2P27930 398 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 MAN1A1P33908 653 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 SERPINB6P35237 376 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 STX1AQ16623 288 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms