RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 EPB41L1Q9H4G0 881 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 EPS8L2Q9H6S3 715 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 TRNAU1APQ9NX07 287 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 PCLOQ9Y6V0 5065 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 TRIM49BA6NDI0 452 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 A6NNC1 897 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 FAM90A27PA6NNH2 459 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 CACNB4O00305 520 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 HTRA2O43464 458 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 CPNE3O75131 537 aaKnown RBP10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 FAM13AO94988 1023 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 ZBED1O96006 694 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 CAPN1P07384 714 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 RRM1P23921 792 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 ATICP31939 592 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 OTX2P32243 289 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 DDIT3P35638 169 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 MYL6P60660 151 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 ZACNQ401N2 412 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 MIDNQ504T8 468 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 CATSPEREQ5SY80 951 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 C22orf39Q6P5X5 142 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 CENPQQ7L2Z9 268 aaPredicted RBP10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 UNC93AQ86WB7 457 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 SLC37A2Q8TED4 501 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 AGAP11Q8TF27 550 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 HEPHQ9BQS7 1158 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 TNKS2Q9H2K2 1166 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 BRMS1Q9HCU9 246 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 FAM13BQ9NYF5 915 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 RARRES3Q9UL19 164 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 PPT2Q9UMR5 302 aa10.54□□□□□ -0.72
HDGFL3-204ENST00000563790 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 TLX2O43763 284 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 PFKFB2O60825 505 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 ZNF821O75541 412 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 WISP2O76076 250 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 ZRANB2O95218 330 aaKnown RBP eCLIP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 KLK3P07288 261 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 HOXC4P09017 264 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 CHRNB4P30926 498 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 EPHB1P54762 984 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 TBX4P57082 545 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 BSPRYQ5W0U4 402 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 KRT79Q5XKE5 535 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 LCN10Q6JVE6 187 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 SCARA5Q6ZMJ2 495 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 YTHDF3Q7Z739 585 aaKnown RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 NLRP8Q86W28 1048 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 BPHLQ86WA6 291 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 VWA5B2Q8N398 1253 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 SFRP1Q8N474 314 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 MYRIPQ8NFW9 859 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 OR52K2Q8NGK3 314 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 LRFN5Q96NI6 719 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 DMRT3Q9NQL9 472 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■■■■■ 28.2
HDGFL3-204ENST00000563790 VPS28Q9UK41 221 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 ZNF407Q9C0G0 2248 aa10.53□□□□□ -0.72
HDGFL3-204ENST00000563790 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 TCAF2A6NFQ2 919 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 PEX12O00623 359 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 SPTLC2O15270 562 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 GSDMDP57764 484 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 AIMP2Q13155 320 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 ORC2Q13416 577 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 TUBB3Q13509 450 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 AGERQ15109 404 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 ZNF805Q5CZA5 627 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 C10orf62Q5T681 223 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 FAM198BQ6UWH4 519 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 C12orf54Q6X4T0 127 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 CIR1Q86X95 450 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 EID3Q8N140 333 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 THAP3Q8WTV1 239 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 KLHL6Q8WZ60 621 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 ZSCAN16Q9H4T2 348 aaPredicted RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 CARS2Q9HA77 564 aaKnown RBP10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 ABCC13Q9NSE7 274 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 P4HTMQ9NXG6 502 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 MOSPD1Q9UJG1 213 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 COQ6Q9Y2Z9 468 aa10.52□□□□□ -0.73
HDGFL3-204ENST00000563790 PCCBP05166 539 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 TYRP1P17643 537 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 HADHAP40939 763 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 MAPK9P45984 424 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 POLD2P49005 469 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 TKTL1P51854 596 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 CCNHP51946 323 aaPredicted RBP10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 DLX5P56178 289 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 HHEXQ03014 270 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 FAM174BQ3ZCQ3 159 aa10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 CPLX2Q6PUV4 134 aaKnown RBP10.51□□□□□ -0.73
HDGFL3-204ENST00000563790 MEX3DQ86XN8 651 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms