RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 WISP3O95389 354 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 MLYCDO95822 493 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 IGHA2P01877 340 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ITGB2P05107 769 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PYGLP06737 847 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 GPIP06744 558 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 COL6A1P12109 1028 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 LBPP18428 481 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 FDXRP22570 491 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ABCG1P45844 678 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PKNOX1P55347 436 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ESRRGP62508 458 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 MS4A2Q01362 244 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ITKQ08881 620 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 MGAT3Q09327 533 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ITGA7Q13683 1181 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 DSC3Q14574 896 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 RPS6KA2Q15349 733 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 TRIP4Q15650 581 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 SLC5A9Q2M3M2 681 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 MGAT5BQ3V5L5 792 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PPM1LQ5SGD2 360 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ZNF678Q5SXM1 525 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 INTS11Q5TA45 600 aaKnown RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 MFSD14CQ5VZR4 134 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 KRT80Q6KB66 452 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PPP4R4Q6NUP7 873 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 C8orf82Q6P1X6 216 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 CNSTQ6PJW8 725 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 LARP4Q71RC2 724 aaKnown RBP eCLIP7.48□□□□□ -1.212e-7■□□□□ 8.4
CFDP1-202ENST00000562602 GALNT13Q8IUC8 556 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 NKAPQ8N5F7 415 aaKnown RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 AADATQ8N5Z0 425 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 LEMD2Q8NC56 503 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 NETO2Q8NC67 525 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ACVR1CQ8NER5 493 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 OR6P1Q8NGX9 317 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 STAG3L4Q8TBR4 150 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 BRSK1Q8TDC3 778 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 C19orf60Q96EN9 201 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 SCARF2Q96GP6 870 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 SLC45A3Q96JT2 553 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PKP2Q99959 881 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 C9orf16Q9BUW7 83 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 TRIM54Q9BYV2 358 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 SLC2A11Q9BYW1 496 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 CCDC68Q9H2F9 335 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 CD320Q9NPF0 282 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PRDM5Q9NQX1 630 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 RGS18Q9NS28 235 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ETAA1Q9NY74 926 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 IL37Q9NZH6 218 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 ATXN10Q9UBB4 475 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 G3BP2Q9UN86 482 aaKnown RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 SLC8A2Q9UPR5 921 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 MYRFQ9Y2G1 1151 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 AP3M1Q9Y2T2 418 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 PCDHB5Q9Y5E4 795 aa7.48□□□□□ -1.21
CFDP1-202ENST00000562602 TIMM13Q9Y5L4 95 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-202ENST00000562602 A0A087WXM4 84 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 E7ENX8 843 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 STX16O14662 325 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 GIPC1O14908 333 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 AZIN1O14977 448 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 CD3EAPO15446 510 aaKnown RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 RAMP2O60895 175 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 KERAO60938 352 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 CRCPO75575 148 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 TRPA1O75762 1119 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 SUPT7LO94864 414 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 BMP10O95393 424 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 H6PDO95479 791 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 PEX11BO96011 259 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 CHRNA1P02708 482 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 SERPINF2P08697 491 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 SMIM18P0DKX4 95 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 ZNF23P17027 643 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 ZNF26P17031 533 aaPredicted RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 PSMA3P25788 255 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 PSMA4P25789 261 aaKnown RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 CD86P42081 329 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 RAD51Q06609 339 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 LCP2Q13094 533 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 SERINC3Q13530 473 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 PEX6Q13608 980 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 APOFQ13790 326 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 POLD3Q15054 466 aaPredicted RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 SMAD1Q15797 465 aaKnown RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 KCTD21Q4G0X4 260 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 LRRC23Q53EV4 343 aaPredicted RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 AARS2Q5JTZ9 985 aaKnown RBP7.47□□□□□ -1.21
CFDP1-202ENST00000562602 FAM26DQ5JW98 314 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 GNASQ5JWF2 1037 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 PRAMEF19Q5SWL8 479 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 TMEM198Q66K66 360 aa7.47□□□□□ -1.21
CFDP1-202ENST00000562602 ANKS6Q68DC2 871 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms