RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 TSNARE1Q96NA8 513 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 KLHL32Q96NJ5 620 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 NDNQ99608 321 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 MRPL57Q9BQC6 102 aaKnown RBP9.5□□□□□ -0.89
CDH13-205ENST00000562307 CIPCQ9C0C6 399 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 ZDHHC6Q9H6R6 413 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 BRD9Q9H8M2 597 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 BPIFA1Q9NP55 256 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 IGSF5Q9NSI5 407 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 THAP1Q9NVV9 213 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 OXSMQ9NWU1 459 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 KLHL14Q9P2G3 628 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 PLA2G4CQ9UP65 541 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 CRYL1Q9Y2S2 319 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 COMMD10Q9Y6G5 202 aa9.5□□□□□ -0.89
CDH13-205ENST00000562307 A0A0U1RQS6 177 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 NPIPB15A6NHN6 443 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 CCT8L1PA6NM43 557 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 TRIM13O60858 407 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 TBX10O75333 385 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 H2AFYO75367 372 aaKnown RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 LEFTY1O75610 366 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 SRP72O76094 671 aaKnown RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 UGT2B4P06133 528 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 LTA4HP09960 611 aaKnown RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 TROVE2P10155 538 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDH13-205ENST00000562307 RALBP11234 206 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 NEFHP12036 1026 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 BMP1P13497 986 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 TIMP2P16035 220 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 ZNF30P17039 623 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 BPIP17213 487 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 PSMC3P17980 439 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 KCNA4P22459 653 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 GJA4P35212 333 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 LTBRP36941 435 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 CDKN1CP49918 316 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 PGGT1BP53609 377 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 IRX4P78413 519 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 PTSQ03393 145 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 DLX2Q07687 328 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 MESP2Q0VG99 397 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 ZNF460Q14592 562 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 ACAP2Q15057 778 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 FAM83EQ2M2I3 478 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 GPR33Q49SQ1 333 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 SETMARQ53H47 684 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 ZRANB3Q5FWF4 1079 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 AGAP9Q5VTM2 703 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 LYPLAL1Q5VWZ2 237 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 ZDHHC20Q5W0Z9 365 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 LRRC8EQ6NSJ5 796 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 TMEM207Q6UWW9 146 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 ZYG11AQ6WRX3 759 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 SNX20Q7Z614 316 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 TBC1D1Q86TI0 1168 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 C10orf107Q8IVU9 208 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 STK40Q8N2I9 435 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 FSTL5Q8N475 847 aaPredicted RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 CCDC63Q8NA47 563 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 HEXDCQ8WVB3 486 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 NXPE3Q969Y0 559 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 BIRC8Q96P09 236 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 P2RY12Q9H244 342 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 MRPL46Q9H2W6 279 aaKnown RBP9.49□□□□□ -0.89
CDH13-205ENST00000562307 TMEM245Q9H330 911 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 GPAMQ9HCL2 828 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 IL26Q9NPH9 171 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 IL36AQ9UHA7 158 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 MED16Q9Y2X0 877 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 MTCH2Q9Y6C9 303 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 MYOFQ9NZM1 2061 aa9.49□□□□□ -0.89
CDH13-205ENST00000562307 TMEM265A0A087WTH1 108 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 CCDC189A1A4V9 331 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 ARNTLO00327 626 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 BNIP3LO60238 219 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 SLC4A1P02730 911 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 ESR1P03372 595 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 CTSLP07711 333 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 RBP1P09455 135 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 CCDC166P0CW27 439 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 MYL2P10916 166 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 PKMP14618 531 aaKnown RBP9.48□□□□□ -0.89
CDH13-205ENST00000562307 LHCGRP22888 699 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 RPS3P23396 243 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDH13-205ENST00000562307 NFKBIAP25963 317 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 FMO4P31512 558 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 VIPR1P32241 457 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 PPARGP37231 505 aaPredicted RBP9.48□□□□□ -0.89
CDH13-205ENST00000562307 SPAM1P38567 509 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 DNAJB13P59910 316 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 PFKPQ01813 784 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 IFT88Q13099 833 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 HNRNPA1L2Q32P51 320 aaKnown RBP9.48□□□□□ -0.89
CDH13-205ENST00000562307 LRIT3Q3SXY7 679 aa9.48□□□□□ -0.89
CDH13-205ENST00000562307 GLIPR1L2Q4G1C9 344 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms