RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 EIF2B5Q13144 721 aaKnown RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 KCNJ11Q14654 390 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 NFATC4Q14934 902 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 TAF1AQ15573 450 aaPredicted RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 PIP4P1Q86T03 277 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 LINC00523Q86TU6 105 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 KIAA2013Q8IYS2 634 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 GPR26Q8NDV2 337 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 CCHCR1Q8TD31 782 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 RUNDC3BQ96NL0 473 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 MYOCQ99972 504 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 APOOQ9BUR5 198 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 IL21RQ9HBE5 538 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 RAB6BQ9NRW1 208 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 RAD18Q9NS91 495 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 DLL3Q9NYJ7 618 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 RIMKLBQ9ULI2 386 aa13.38□□□□□ -0.27
CDH1-204ENST00000562118 CNOT6Q9ULM6 557 aaKnown RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 FNDC3AQ9Y2H6 1198 aaKnown RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 ZFC3H1O60293 1989 aaKnown RBP13.38□□□□□ -0.27
CDH1-204ENST00000562118 SPEGQ15772 3267 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 MROH6A6NGR9 719 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 AGAP14A8MT82 685 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 H7C0S8 307 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 KIF2AO00139 706 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 TNFRSF10CO14798 259 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 USP12O75317 370 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 KRT14P02533 472 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 CSF2P04141 144 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 CD59P13987 128 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 NME1P15531 152 aaKnown RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 BPIP17213 487 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 EPHA8P29322 1005 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 CDK3Q00526 305 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 PTK6Q13882 451 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 AASDHQ4L235 1098 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 ZDHHC20Q5W0Z9 365 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 SYDE1Q6ZW31 735 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 PTAR1Q7Z6K3 402 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 PARGQ86W56 976 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 SLC25A41Q8N5S1 370 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 PAF1Q8N7H5 531 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 BAHD1Q8TBE0 780 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 SAP25Q8TEE9 199 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 PEX13Q92968 403 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 SCAMP4Q969E2 229 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 VPS35Q96QK1 796 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 RANBP9Q96S59 729 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 AGAP2Q99490 1192 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 APOL2Q9BQE5 337 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
CDH1-204ENST00000562118 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 SMOXQ9NWM0 555 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH1-204ENST00000562118 KLF15Q9UIH9 416 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 SLC17A4Q9Y2C5 497 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 DGKBQ9Y6T7 804 aa13.37□□□□□ -0.27
CDH1-204ENST00000562118 FADS2P1A8MWK0 482 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 ECEL1O95672 775 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 PCCBP05166 539 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 GIMD1P0DJR0 217 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 GRIA1P42261 906 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 MAGEA3P43357 314 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 CCT8P50990 548 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 PDE1BQ01064 536 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 ACVR1Q04771 509 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 CDH17Q12864 832 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 CBLBQ13191 982 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 PDE1CQ14123 709 aaPredicted RBP13.36□□□□□ -0.27
CDH1-204ENST00000562118 PTK2BQ14289 1009 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 GLT6D1Q7Z4J2 308 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 TRAM1L1Q8N609 369 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 SPATA4Q8NEY3 305 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 OR2I1PQ8NGU4 316 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 CPT1BQ92523 772 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 LRRC45Q96CN5 670 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 TRIM44Q96DX7 344 aaPredicted RBP13.36□□□□□ -0.27
CDH1-204ENST00000562118 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 ZSCAN5AQ9BUG6 496 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 RIOK2Q9BVS4 552 aaKnown RBP13.36□□□□□ -0.27
CDH1-204ENST00000562118 LGR4Q9BXB1 951 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 FAM83DQ9H4H8 585 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 WDR26Q9H7D7 661 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 IL26Q9NPH9 171 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 TMPRSS11EQ9UL52 423 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 OR1A2Q9Y585 309 aa13.36□□□□□ -0.27
CDH1-204ENST00000562118 ARL5AQ9Y689 179 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms