RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 CHST12Q9NRB3 414 aa18.63■□□□□ 0.57
BBS4-204ENST00000562084 SDR39U1Q9NRG7 319 aaPredicted RBP18.63■□□□□ 0.57
BBS4-204ENST00000562084 TREX1Q9NSU2 369 aa18.63■□□□□ 0.57
BBS4-204ENST00000562084 PIGVQ9NUD9 493 aa18.63■□□□□ 0.57
BBS4-204ENST00000562084 TSC2P49815 1807 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 INPP4BO15327 924 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 TSPAN1O60635 241 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 CLIC3O95833 236 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 ARNTP27540 789 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 GEMP55040 296 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 ZBTB6Q15916 424 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 CRY1Q16526 586 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 UGT3A2Q3SY77 523 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 ZNF678Q5SXM1 525 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 C17orf99Q6UX52 265 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 SPATA6LQ8N4H0 392 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 NPWQ8N729 165 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 SLC2A14Q8TDB8 520 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 TMEM125Q96AQ2 219 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 PGAP3Q96FM1 320 aaPredicted RBP18.62■□□□□ 0.57
BBS4-204ENST00000562084 BTN2A3PQ96KV6 586 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 SPATA33Q96N06 139 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 DUSP16Q9BY84 665 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 ALG2Q9H553 416 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 AKTIPQ9H8T0 292 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 ENTPD7Q9NQZ7 604 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 TMPRSS4Q9NRS4 437 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 TMEM45AQ9NWC5 275 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 FBXW11Q9UKB1 542 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 TSC22D4Q9Y3Q8 395 aa18.62■□□□□ 0.57
BBS4-204ENST00000562084 KDM1AO60341 852 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 SNAP29O95721 258 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 JCHAINP01591 159 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 NTRK1P04629 796 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 GSTT2P0CG29 244 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 GSTT2BP0CG30 244 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 CAPN3P20807 821 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 KCNA5P22460 613 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 ETFBP38117 255 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 LEPRP48357 1165 aaKnown RBP18.61■□□□□ 0.57
BBS4-204ENST00000562084 ALDH3A2P51648 485 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 TRIM32Q13049 653 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 FXNQ16595 210 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
BBS4-204ENST00000562084 NDUFA5Q16718 116 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 TTC23Q5W5X9 447 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 ZNF470Q6ECI4 717 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 THAP5Q7Z6K1 395 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 PIK3C3Q8NEB9 887 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 USP33Q8TEY7 942 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 STARD8Q92502 1023 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 KCTD14Q9BQ13 255 aaPredicted RBP18.61■□□□□ 0.57
BBS4-204ENST00000562084 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 ERAP1Q9NZ08 941 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 SPATA7Q9P0W8 599 aa18.61■□□□□ 0.57
BBS4-204ENST00000562084 GMPR2Q9P2T1 348 aaKnown RBP18.61■□□□□ 0.57
BBS4-204ENST00000562084 RBM47A0AV96 593 aaKnown RBP18.6■□□□□ 0.57
BBS4-204ENST00000562084 TULP3O75386 442 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 NPPAP01160 153 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 LBPP18428 481 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 HTR1EP28566 365 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 AXLP30530 894 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 POLR2IP36954 125 aaKnown RBP18.6■□□□□ 0.57
BBS4-204ENST00000562084 PNPLA4P41247 253 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 GSK3BP49841 420 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 PGGT1BP53609 377 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 BFSP2Q13515 415 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 NEPROQ6NW34 567 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 ESRP1Q6NXG1 681 aaKnown RBP18.6■□□□□ 0.57
BBS4-204ENST00000562084 BLOC1S3Q6QNY0 202 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 CYP2U1Q7Z449 544 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 BPIFB1Q8TDL5 484 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 AURKBQ96GD4 344 aaPredicted RBP18.6■□□□□ 0.57
BBS4-204ENST00000562084 ZNF560Q96MR9 790 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 LHPPQ9H008 270 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 SPATC1LQ9H0A9 340 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 SCN1AP35498 2009 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 SYNJ2BP-COX16A0A087WUM0 186 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 FAM72CH0Y354 149 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 UBFD1O14562 309 aaKnown RBP18.6■□□□□ 0.57
BBS4-204ENST00000562084 PFDN6O15212 129 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 ARIH2O95376 493 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 F9P00740 461 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 CRHBPP24387 322 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 HERVK_113P63132 956 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 PITX1P78337 314 aaPredicted RBP18.6■□□□□ 0.57
BBS4-204ENST00000562084 VPS26BQ4G0F5 336 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 FAM72AQ5TYM5 149 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 C9orf57Q5W0N0 161 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 FAM72DQ6L9T8 149 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 PRR23BQ6ZRT6 265 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 ARMCX2Q7L311 632 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 SPATA19Q7Z5L4 167 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 FAM72BQ86X60 149 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 LPIN3Q9BQK8 851 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 ERVK-6Q9BXR3 956 aa18.6■□□□□ 0.57
BBS4-204ENST00000562084 TUT1Q9H6E5 874 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms