RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP3-220ENST00000561381 KIAA1524Q8TCG1 905 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 LRRN4Q8WUT4 740 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 TEKT4Q8WW24 435 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 USP7Q93009 1102 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 SCRN2Q96FV2 425 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 MCCC1Q96RQ3 725 aaPredicted RBP11.61□□□□□ -0.55
USP3-220ENST00000561381 NUDT22Q9BRQ3 303 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 NUP85Q9BW27 656 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 GSDMCQ9BYG8 508 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 CD84Q9UIB8 345 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 ANAPC7Q9UJX3 599 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 ACSL6Q9UKU0 697 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 TMEM98Q9Y2Y6 226 aa11.61□□□□□ -0.55
USP3-220ENST00000561381 CFAP46Q8IYW2 2715 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 A0A1W2PQ67 120 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 RHPN2P1A8MT19 583 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 C9orf172C9J069 976 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 MFSD11O43934 449 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 MAP3K6O95382 1288 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 CCL4P13236 92 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
USP3-220ENST00000561381 ADCY8P40145 1251 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 CDH6P55285 790 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 CTBSQ01459 385 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 ILF3Q12906 894 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP3-220ENST00000561381 KRT81Q14533 505 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 LINC00303Q3SY05 128 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 ATP13A4Q4VNC1 1196 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 ARMC12Q5T9G4 340 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 NKAIN2Q5VXU1 208 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 LRRC66Q68CR7 880 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 ZNF574Q6ZN55 896 aaPredicted RBP11.6□□□□□ -0.55
USP3-220ENST00000561381 USP45Q70EL2 814 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 ZNF438Q7Z4V0 828 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 NAGSQ8N159 534 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 BBS5Q8N3I7 341 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 TEX26Q8N6G2 289 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 NIPA2Q8N8Q9 360 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 EXD3Q8N9H8 876 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 RCBTB1Q8NDN9 531 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 NSMCE1Q8WV22 266 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 SCAMP4Q969E2 229 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 MED8Q96G25 268 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 CMKLR1Q99788 373 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 FUCA2Q9BTY2 467 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 TRNAU1APQ9NX07 287 aaKnown RBP11.6□□□□□ -0.55
USP3-220ENST00000561381 IP6K2Q9UHH9 426 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 SLC17A4Q9Y2C5 497 aa11.6□□□□□ -0.55
USP3-220ENST00000561381 A0A087X0T9 212 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 B8ZZF3 427 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 J3QKU1 62 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 PSMD11O00231 422 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 PPM1DO15297 605 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 FZD6O60353 706 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 CPNE6O95741 557 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 CYP1A2P05177 515 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 IVLP07476 585 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 FAM228BP0C875 321 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 LIPCP11150 499 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 TEAD1P28347 426 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 CD1CP29017 333 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 SERPINB6P35237 376 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 GJC1P36383 396 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 PBX1P40424 430 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
USP3-220ENST00000561381 GPR1P46091 355 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 ARSEP51690 589 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 DSC2Q02487 901 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 PTSQ03393 145 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 ITKQ08881 620 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 NR1D2Q14995 579 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 FIGNQ5HY92 759 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 RALGPS1Q5JS13 557 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 NCBP2-AS2Q69YL0 99 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
USP3-220ENST00000561381 PIM3Q86V86 326 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 CPLX3Q8WVH0 158 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 PMEPA1Q969W9 287 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 TMEM159Q96B96 161 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 AGAP2Q99490 1192 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 ABCG8Q9H221 673 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 PPIL1Q9Y3C6 166 aa11.59□□□□□ -0.55
USP3-220ENST00000561381 TRBV23OR9-2A0A075B6M9 112 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 IGHV5-10-1A0A0J9YXX1 117 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 CAPN8A6NHC0 703 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 PRLP01236 227 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 SERPING1P05155 500 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 MPSTP25325 297 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 NFKBIAP25963 317 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 CSF2RBP32927 897 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
USP3-220ENST00000561381 ACTR1BP42025 376 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 ACTR1AP61163 376 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 FANCCQ00597 558 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 DPTQ07507 201 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 GALNT2Q10471 571 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 DPYSL3Q14195 570 aa11.58□□□□□ -0.56
USP3-220ENST00000561381 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms