RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CACNB4O00305 520 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 ENC1O14682 589 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 FFAR2O15552 330 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 ZNF189O75820 626 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 RASGRP1O95267 797 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 AGTP01019 485 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 CEACAM5P06731 702 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 CELA2BP08218 269 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 MYCLP1P12525 358 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 GEMP55040 296 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 SHC2P98077 582 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 DNAJC3Q13217 504 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 OLIG2Q13516 323 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 C1orf61Q13536 156 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 RAET1GQ6H3X3 334 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 RAB44Q7Z6P3 723 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 SLC25A41Q8N5S1 370 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 PNPLA1Q8N8W4 532 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 FAM181AQ8N9Y4 354 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 GPR26Q8NDV2 337 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 LMX1AQ8TE12 382 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 PTCD2Q8WV60 388 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 ADAMTS14Q8WXS8 1223 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 COX14Q96I36 57 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 FERMT1Q9BQL6 677 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 TMEM121Q9BTD3 319 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 FRMD8P1Q9BZ68 369 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 MRPL40Q9NQ50 206 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 PHPT1Q9NRX4 125 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 NLGN3Q9NZ94 848 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 NFKBIL1Q9UBC1 381 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 SPASTQ9UBP0 616 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 KLQ9UEF7 1012 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 ASXL3Q9C0F0 2248 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 CEP295Q9C0D2 2601 aa15.21■□□□□ 0.03
SNRPA1-213ENST00000560856 NEMP2A6NFY4 417 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 FADS2P1A8MWK0 482 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 TPP1O14773 563 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 ANXA9O76027 345 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 STK10O94804 968 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 METTL18O95568 372 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 HLA-DPA1P20036 260 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 KELP23276 732 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 GPR1P46091 355 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 ACADVLP49748 655 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 BLKP51451 505 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 GSE1Q14687 1217 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 KCTD11Q693B1 232 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 DENND5AQ6IQ26 1287 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 CCDC70Q6NSX1 233 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 ATL2Q8NHH9 583 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 CCHCR1Q8TD31 782 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 C1orf54Q8WWF1 131 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 SCARF2Q96GP6 870 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 SRPK1Q96SB4 655 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 SLC13A1Q9BZW2 595 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 FAM83DQ9H4H8 585 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 PKD2L2Q9NZM6 624 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 APOBEC2Q9Y235 224 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 SLC17A4Q9Y2C5 497 aa15.2■□□□□ 0.02
SNRPA1-213ENST00000560856 PRSS38A1L453 326 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 PDE2AO00408 941 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 YY2O15391 372 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 TNFP01375 233 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 FGF1P05230 155 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 BPIP17213 487 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 CKMT2P17540 419 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 STIP1P31948 543 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 CXCR5P32302 372 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 POLD2P49005 469 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 DCDC1P59894 354 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 PARP6Q2NL67 630 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 DEFB133Q30KQ1 61 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 DRICH1Q6PGQ1 229 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 RD3Q7Z3Z2 195 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 FSTL5Q8N475 847 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 CHCHD4Q8N4Q1 142 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 ANP32BQ92688 251 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 APOLD1Q96LR9 279 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 BOCQ9BWV1 1114 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 GPR63Q9BZJ6 419 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 TRABDQ9H4I3 376 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 ARNT2Q9HBZ2 717 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 IL17CQ9P0M4 197 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 AAR2Q9Y312 384 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 JRKLQ9Y4A0 524 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 OAS3Q9Y6K5 1087 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-213ENST00000560856 CHD8Q9HCK8 2581 aa15.18■□□□□ 0.02
SNRPA1-213ENST00000560856 GOLGA6CA6NDK9 693 aa15.18■□□□□ 0.02
SNRPA1-213ENST00000560856 GOLGA6BA6NDN3 693 aa15.18■□□□□ 0.02
SNRPA1-213ENST00000560856 USP27XA6NNY8 438 aa15.18■□□□□ 0.02
SNRPA1-213ENST00000560856 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
SNRPA1-213ENST00000560856 HYAL3O43820 417 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-213ENST00000560856 TRIM16O95361 564 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms