RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PLEKHM1Q9Y4G2 1056 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 CSAG2Q9Y5P2 127 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 TYW5A2RUC4 315 aaKnown RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 PRAMEF27A3QJZ7 478 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 IRAK2O43187 625 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 CTAG2O75638 210 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 UNC5CO95185 931 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 LATS1O95835 1130 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 TNFP01375 233 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 CTSLP07711 333 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 TMEM191BP0C7N4 346 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 CD19P15391 556 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 MX2P20592 715 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 HTR1BP28222 390 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 MAP2K3P46734 347 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 ETF1P62495 437 aaKnown RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 DEFA6Q01524 100 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 RBPJQ06330 500 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 DMPKQ09013 629 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 KEAP1Q14145 624 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 MYBPC3Q14896 1274 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 SLFN12LQ6IEE8 588 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 ENPP7Q6UWV6 458 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 PAMR1Q6UXH9 720 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 C1orf186Q6ZWK4 172 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 CCDC186Q7Z3E2 898 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 VPS36Q86VN1 386 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 DMRTC2Q8IXT2 367 aaPredicted RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 APCDD1Q8J025 514 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 FUKQ8N0W3 1084 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 DNAAF3Q8N9W5 541 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 HJURPQ8NCD3 748 aaPredicted RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 FAM13CQ8NE31 585 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 ATL2Q8NHH9 583 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 ADAMTS18Q8TE60 1221 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 ASB12Q8WXK4 309 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 ERCC4Q92889 916 aaPredicted RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 AHCYL2Q96HN2 611 aaKnown RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 BDH2Q9BUT1 245 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 DDX19AQ9NUU7 478 aaKnown RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 SIDT1Q9NXL6 827 aaKnown RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 LARSQ9P2J5 1176 aaKnown RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 KLQ9UEF7 1012 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 FADS3Q9Y5Q0 445 aa6.43□□□□□ -1.38
HERC1-208ENST00000560462 NCOA6Q14686 2063 aaPredicted RBP6.43□□□□□ -1.38
HERC1-208ENST00000560462 WNK1Q9H4A3 2382 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 GOLGA6L3A6NEY3 463 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 TMEM110-MUSTN1A8MSY1 372 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 RASA4BC9J798 803 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 ANKRD63C9JTQ0 380 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 LINC01387J3KSC0 135 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 ARHGEF9O43307 516 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 RASA4O43374 803 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 PEX14O75381 377 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 DEXIO95424 95 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 FAM163BP0C2L3 166 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 ADRB3P13945 408 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 SCP2P22307 547 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 CHRNA3P32297 505 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 CA5AP35218 305 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 NUMBP49757 651 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 PEX5P50542 639 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 NEK3P51956 506 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 VAV2P52735 878 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 SULT2A1Q06520 285 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 LAMB3Q13751 1172 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 ZNF169Q14929 603 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 DLG2Q15700 870 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 EARS2Q5JPH6 523 aaKnown RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 C20orf194Q5TEA3 1177 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 ZNF324BQ6AW86 544 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 FAM199XQ6PEV8 388 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 C20orf204Q6ZNR8 217 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 C17orf82Q86X59 251 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 TMIEQ8NEW7 156 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 GOT1L1Q8NHS2 421 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 DNAJB14Q8TBM8 379 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 PPP4R1Q8TF05 950 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 NR4A3Q92570 626 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 KCNN1Q92952 543 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 NACC2Q96BF6 587 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 WDR89Q96FK6 387 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 PPP1R16AQ96I34 528 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 DDX50Q9BQ39 737 aaKnown RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 RNF32Q9H0A6 362 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.42□□□□□ -1.38
HERC1-208ENST00000560462 ZNF552Q9H707 407 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 ZBTB20Q9HC78 741 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 SLC25A13Q9UJS0 675 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 DNM3Q9UQ16 869 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 FARSAQ9Y285 508 aaKnown RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 HIF3AQ9Y2N7 669 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 HRNRQ86YZ3 2850 aaPredicted RBP6.42□□□□□ -1.38
HERC1-208ENST00000560462 TRPM6Q9BX84 2022 aa6.42□□□□□ -1.38
HERC1-208ENST00000560462 MDC1Q14676 2089 aaKnown RBP6.41□□□□□ -1.38
HERC1-208ENST00000560462 GOLGA6L7A0A1B0GV03 622 aa6.41□□□□□ -1.38
HERC1-208ENST00000560462 TISP43B9A030 160 aa6.41□□□□□ -1.38
HERC1-208ENST00000560462 HHLA1C9JL84 531 aa6.41□□□□□ -1.38
HERC1-208ENST00000560462 E9PMD0 336 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms