RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TMEM9BQ9NQ34 198 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 RAB6BQ9NRW1 208 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 UCKL1Q9NWZ5 548 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 DLL3Q9NYJ7 618 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 PAK5Q9P286 719 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 AAR2Q9Y312 384 aaKnown RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 ST14Q9Y5Y6 855 aa11.4□□□□□ -0.58
SNX1-204ENST00000559061 OAS3Q9Y6K5 1087 aaKnown RBP11.4□□□□□ -0.58
SNX1-204ENST00000559061 CCL22O00626 93 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 SLC30A4O14863 429 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 TP73O15350 636 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 CBFA2T3O75081 653 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 SYPP08247 313 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 TPH1P17752 444 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 PSMA3P25788 255 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 IVDP26440 423 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 EPHA8P29322 1005 aaPredicted RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 HMGCLP35914 325 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 FDFT1P37268 417 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 FNTAP49354 379 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 VPS41P49754 854 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 C21orf59P57076 290 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 KIAA1024LP59773 190 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 DCDC1P59894 354 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 CDK3Q00526 305 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 KHDC1Q4VXA5 237 aaKnown RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 ALS2CLQ60I27 953 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 ADAMTSL4Q6UY14 1074 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 MACC1Q6ZN28 852 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 NLRP8Q86W28 1048 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 GATAD2AQ86YP4 633 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 RAVER1Q8IY67 606 aaKnown RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 NRSN1Q8IZ57 195 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 COL27A1Q8IZC6 1860 aaPredicted RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 SLC25A45Q8N413 288 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 ATL2Q8NHH9 583 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 BAHD1Q8TBE0 780 aaPredicted RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 NETO1Q8TDF5 533 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 BLOC1S5Q8TDH9 187 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 SAP25Q8TEE9 199 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 OR1E3Q8WZA6 343 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 CPT1BQ92523 772 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 AP2M1Q96CW1 435 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 CCDC97Q96F63 343 aaPredicted RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 CAMK1GQ96NX5 476 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 FRMD8Q9BZ67 464 aaPredicted RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 LRRC40Q9H9A6 602 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 MRPL40Q9NQ50 206 aaKnown RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 CASS4Q9NQ75 786 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 GDF3Q9NR23 364 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 HOMER3Q9NSC5 361 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 PCYOX1Q9UHG3 505 aa11.39□□□□□ -0.59
SNX1-204ENST00000559061 ZFC3H1O60293 1989 aaKnown RBP11.39□□□□□ -0.59
SNX1-204ENST00000559061 SCAMP1O15126 338 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 SDC3O75056 442 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 CER1O95813 267 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 KRT14P02533 472 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 CSF2P04141 144 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 CEACAM5P06731 702 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 HOXC4P09017 264 aaPredicted RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 ZNF883P0CG24 379 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 NME1P15531 152 aaKnown RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 TSHRP16473 764 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 YPEL5P62699 121 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 MRPS25P82663 173 aaKnown RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 XIAPP98170 497 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 PRPSAP1Q14558 356 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 CERCAMQ5T4B2 595 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 ZNF648Q5T619 568 aaPredicted RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 RAET1GQ6H3X3 334 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 IL27RAQ6UWB1 636 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 ZNF572Q7Z3I7 529 aaPredicted RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 GLT6D1Q7Z4J2 308 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 PARGQ86W56 976 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 NDUFAF2Q8N183 169 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 CCDC89Q8N998 374 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 OR13C4Q8NGS5 318 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 NAP1L3Q99457 506 aaPredicted RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 FERMT1Q9BQL6 677 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 C1QTNF7Q9BXJ2 289 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 IL26Q9NPH9 171 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 EIF2B3Q9NR50 452 aaKnown RBP11.38□□□□□ -0.59
SNX1-204ENST00000559061 TM7SF3Q9NS93 570 aa11.38□□□□□ -0.59
SNX1-204ENST00000559061 LY6G6EA0A0G2JKS1 128 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 RGSL1A5PLK6 1076 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 MROH6A6NGR9 719 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 GIPC1O14908 333 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 PCDHGA12O60330 932 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 FOXD2O60548 495 aaPredicted RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 PIAS2O75928 621 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 APRTP07741 180 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 MYCLP1P12525 358 aaPredicted RBP11.37□□□□□ -0.59
SNX1-204ENST00000559061 TPSB2P20231 275 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 CASQ1P31415 396 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 POLD2P49005 469 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 CCT8P50990 548 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 ARSDP51689 593 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 C2orf54Q08AI8 447 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 GPS1Q13098 491 aa11.37□□□□□ -0.59
SNX1-204ENST00000559061 PEX6Q13608 980 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms