RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 ERBB2P04626 1255 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 ANXA8P13928 327 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 MMP8P22894 467 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 MYF6P23409 242 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 GCAP28676 217 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 MCAMP43121 646 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 CCR10P46092 362 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 TKTL1P51854 596 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 WDR4P57081 412 aaKnown RBP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 CYP27A1Q02318 531 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 GAD2Q05329 585 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 ZNF91Q05481 1191 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 EHHADHQ08426 723 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 STX5Q13190 355 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 CCNIQ14094 377 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 PUM1Q14671 1186 aaKnown RBP eCLIP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 SEC23AQ15436 765 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 CA9Q16790 459 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 FAM110CQ1W6H9 321 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 EPC2Q52LR7 807 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 FGD3Q5JSP0 725 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 ANXA8L1Q5VT79 327 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 ALG1LQ6GMV1 187 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 SLFN12LQ6IEE8 588 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 GPAT2Q6NUI2 795 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 TMEM65Q6PI78 240 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 TFAP2EQ6VUC0 442 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 TRABD2AQ86V40 505 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 JAMLQ86YT9 394 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 HIPK1Q86Z02 1210 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 TIGD4Q8IY51 512 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 UBQLNLQ8IYU4 475 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 FBXW8Q8N3Y1 598 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 MFSD2AQ8NA29 543 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 LEMD2Q8NC56 503 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 CLRN3Q8NCR9 226 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 SLC24A4Q8NFF2 622 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 RHOXF1Q8NHV9 184 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 MAGEE2Q8TD90 523 aaPredicted RBP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 DDX1Q92499 740 aaKnown RBP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 SNX19Q92543 992 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 RPL3LQ92901 407 aaKnown RBP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 SNAPC3Q92966 411 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 GMCL1Q96IK5 515 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 ZSWIM3Q96MP5 696 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 OR51V1Q9H2C8 321 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 COG4Q9H9E3 785 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 LIN28AQ9H9Z2 209 aaKnown RBP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 PRDM9Q9NQV7 894 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 TRPS1Q9UHF7 1281 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 CDH22Q9UJ99 828 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 DBR1Q9UK59 544 aaKnown RBP6.5□□□□□ -1.37
IDH3A-206ENST00000558535 COG5Q9UP83 839 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 ACTL7AQ9Y615 435 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 HSPE1-MOB4S4R3N1 261 aa6.5□□□□□ -1.37
IDH3A-206ENST00000558535 PNMA8CA0A1B0GUJ8 204 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 FAM221BA6H8Z2 402 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 A6NL46 340 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ZNF729A6NN14 1252 aaPredicted RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 hCG_1984214I3L0E3 225 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 HRO43593 1189 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 RASAL1O95294 804 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 OPN1LWP04000 364 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 PROS1P07225 676 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 PFKMP08237 780 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ARP10275 920 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 CYP2D6P10635 497 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 IFNAR1P17181 557 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 TCN1P20061 433 aaPredicted RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 CYP2A7P20853 494 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 NOS2P35228 1153 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ETV4P43268 484 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 PRKAA2P54646 552 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 MGAT3Q09327 533 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 PMS2P3Q13401 168 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 MTMR1Q13613 665 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 SKIV2LQ15477 1246 aaKnown RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 PSMD5Q16401 504 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 CYP1B1Q16678 543 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 PGS1Q32NB8 556 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ETV3LQ6ZN32 361 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 USP49Q70CQ1 688 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 NUDCD3Q8IVD9 361 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 POU5F2Q8N7G0 328 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 IL17RDQ8NFM7 739 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 RAET1EQ8TD07 263 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 RFKQ969G6 155 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 C10orf90Q96M02 699 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 TRIM56Q9BRZ2 755 aaKnown RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 TUBGCP2Q9BSJ2 902 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ZYG11BQ9C0D3 744 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 LRRC40Q9H9A6 602 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 FAM207AQ9NSI2 230 aaPredicted RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 TMEM39AQ9NV64 488 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 GRHL1Q9NZI5 618 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.49□□□□□ -1.37
IDH3A-206ENST00000558535 ABCD2Q9UBJ2 740 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 NDRG3Q9UGV2 375 aa6.49□□□□□ -1.37
IDH3A-206ENST00000558535 RIMS3Q9UJD0 308 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms