RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FERMT1Q9BQL6 677 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 TMEM121Q9BTD3 319 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 APOOQ9BUR5 198 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 ABCG8Q9H221 673 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 MAGEE1Q9HCI5 957 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 KCTD5Q9NXV2 234 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 RSPH14Q9UHP6 348 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 TTC7AQ9ULT0 858 aaPredicted RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 DRG1Q9Y295 367 aaKnown RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 ZKSCAN5Q9Y2L8 839 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 SPO11Q9Y5K1 396 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.64□□□□□ -0.87
SRP54-210ENST00000556380 LRRK1Q38SD2 2015 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 CHD8Q9HCK8 2581 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 RGSL1A5PLK6 1076 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 AURKAO14965 403 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 FANCGO15287 622 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 SH3BP5O60239 455 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 KIF5CO60282 957 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 ANXA9O76027 345 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 STK10O94804 968 aaKnown RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 SOD1P00441 154 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 AGTP01019 485 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 CSF2P04141 144 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 ITGAVP06756 1048 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PIRTP0C851 137 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 GIMD1P0DJR0 217 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 NME1P15531 152 aaKnown RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 VARSP26640 1264 aaKnown RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 PSMB4P28070 264 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 EPHA8P29322 1005 aaPredicted RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 CHRNA4P43681 627 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 SPINT3P49223 89 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 CCT8P50990 548 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PDE1CQ14123 709 aaPredicted RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 ARHGEF7Q14155 803 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 SLC1A5Q15758 541 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PARP6Q2NL67 630 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 DENND5AQ6IQ26 1287 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 LYSMD3Q7Z3D4 306 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PTAR1Q7Z6K3 402 aaPredicted RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 NRSN1Q8IZ57 195 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 SLC25A45Q8N413 288 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 TTC30BQ8N4P2 665 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PRELID2Q8N945 189 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 IPMKQ8NFU5 416 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 BAHD1Q8TBE0 780 aaPredicted RBP9.63□□□□□ -0.87
SRP54-210ENST00000556380 COG1Q8WTW3 980 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 SCAMP4Q969E2 229 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 MS4A14Q96JA4 679 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PBKQ96KB5 322 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 CAMK1GQ96NX5 476 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 AGAP2Q99490 1192 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 TEX101Q9BY14 249 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 PCOLCE2Q9UKZ9 415 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 BTBD3Q9Y2F9 522 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 OR1A2Q9Y585 309 aa9.63□□□□□ -0.87
SRP54-210ENST00000556380 C1orf232A0A0U1RR37 186 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 TMEM202A6NGA9 273 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 GIPC1O14908 333 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 CAPN5O15484 640 aaPredicted RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 YKT6O15498 198 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 KCNK5O95279 499 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 PCCBP05166 539 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ETS1P14921 441 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 HLA-DPA1P20036 260 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ARRB1P49407 418 aaPredicted RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 GEMP55040 296 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 KIAA1024LP59773 190 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 IL9RQ01113 521 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 OLIG2Q13516 323 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 SNX1Q13596 522 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 NFATC4Q14934 902 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 SUZ12Q15022 739 aaKnown RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 LONRF2Q1L5Z9 754 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 P3H1Q32P28 736 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ZNF542PQ5EBM4 170 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 PAPD7Q5XG87 772 aaKnown RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 DENND2CQ68D51 928 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 KCTD16Q68DU8 428 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 CCDC70Q6NSX1 233 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ADAMTSL4Q6UY14 1074 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 MACC1Q6ZN28 852 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 PARGQ86W56 976 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 GATAD2AQ86YP4 633 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 NAXDQ8IW45 347 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 GLIS1Q8NBF1 620 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 DEFB124Q8NES8 71 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 NUS1Q96E22 293 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 SRPK1Q96SB4 655 aaKnown RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 OSBPL9Q96SU4 736 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 LGR4Q9BXB1 951 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 TRABDQ9H4I3 376 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ZFYVE1Q9HBF4 777 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 ARNT2Q9HBZ2 717 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 UCKL1Q9NWZ5 548 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 MAP10Q9P2G4 905 aa9.62□□□□□ -0.87
SRP54-210ENST00000556380 NFKBIL1Q9UBC1 381 aaPredicted RBP9.62□□□□□ -0.87
SRP54-210ENST00000556380 CD84Q9UIB8 345 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms