RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 PGS1Q32NB8 556 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 STXBP5Q5T5C0 1151 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 TIFABQ6ZNK6 161 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 FKBP9P1Q75LS8 142 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 FAR2Q96K12 515 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 SPATA17Q96L03 361 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 ACTR8Q9H981 624 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 CCDC154A6NI56 674 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 AXIN1O15169 862 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 SEPT4O43236 478 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 MAFKO60675 156 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 CNPP09543 421 aaKnown RBP14.83□□□□□ -0.04
CUX1-215ENST00000556210 MAP4P27816 1152 aaKnown RBP14.83□□□□□ -0.04
CUX1-215ENST00000556210 HOXD10P28358 340 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 GKP32189 559 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 IL2P60568 153 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 KLHDC10Q6PID8 442 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 TMCO2Q7Z6W1 182 aaPredicted RBP14.83□□□□□ -0.04
CUX1-215ENST00000556210 STK32CQ86UX6 486 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 SIDT2Q8NBJ9 832 aaKnown RBP14.83□□□□□ -0.04
CUX1-215ENST00000556210 GRIN3AQ8TCU5 1115 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 ANKRD49Q8WVL7 239 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 SNX19Q92543 992 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 MAF1Q9H063 256 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 TNKS2Q9H2K2 1166 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 MOSPD1Q9UJG1 213 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 DMTF1Q9Y222 760 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 U3KQV3 271 aa14.83□□□□□ -0.04
CUX1-215ENST00000556210 G3V2L1 256 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 CLASP2O75122 1294 aaKnown RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 LRATO95237 230 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 PABPC4LP0CB38 370 aaKnown RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 MTHFD1P11586 935 aaKnown RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 GJA1P17302 382 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 LBPP18428 481 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TACR2P21452 398 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 AIF1P55008 147 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 COL9A2Q14055 689 aaPredicted RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 CCNIQ14094 377 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 CLYBLQ8N0X4 340 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TWIST2Q8WVJ9 160 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 FAM162AQ96A26 154 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 MRGPRX2Q96LB1 330 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 ADGRE3Q9BY15 652 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 MTF2Q9Y483 593 aaPredicted RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 C1orf232A0A0U1RR37 186 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 CAPN14A8MX76 684 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 CDC7O00311 574 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 CLIC3O95833 236 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 CORO1AP31146 461 aaKnown RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 LSAMPQ13449 338 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 MS4A13Q5J8X5 152 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 NAT16Q8N8M0 369 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 PKP2Q99959 881 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 GPR62Q9BZJ7 368 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TMEM165Q9HC07 324 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 GALPQ9UBC7 116 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 STK39Q9UEW8 545 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TRIM38O00635 465 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 SEC22BO75396 215 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 RHOQP17081 205 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 EFNA1P20827 205 aaPredicted RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 RGS4P49798 205 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TRAF2Q12933 501 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 SAMD4BQ5PRF9 694 aaKnown RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 HECTD3Q5T447 861 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TRIM74Q86UV6 250 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 TRIM73Q86UV7 250 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 OFCC1Q8IZS5 231 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 FAM47BQ8NA70 645 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 RIC8BQ9NVN3 520 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 ATP11BQ9Y2G3 1177 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 SSC5DA1L4H1 1573 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 MBLAC1A4D2B0 266 aaPredicted RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 ASLP04424 464 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 ARRB2P32121 409 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 PIK3R6Q5UE93 754 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 PPP1R2P1Q96PQ5 205 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 RUBCNLQ9H714 662 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 EIF2B4Q9UI10 523 aaKnown RBP14.82□□□□□ -0.04
CUX1-215ENST00000556210 DNMT3LQ9UJW3 386 aa14.82□□□□□ -0.04
CUX1-215ENST00000556210 WNK3Q9BYP7 1800 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 TRIP11Q15643 1979 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 PTGES3LE9PB15 166 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 GSNP06396 782 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 HIST1H2AGP0C0S8 130 aaPredicted RBP14.81□□□□□ -0.04
CUX1-215ENST00000556210 HIST1H2ADP20671 130 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 UGT1A1P22309 533 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 UGT1A4P22310 534 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 GABRB3P28472 473 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 UGT1A3P35503 534 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 UGT1A5P35504 534 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 SP3Q02447 781 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 TCEA2Q15560 299 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 AP5B1Q2VPB7 878 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 FAM45BPQ6NSW5 357 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 MAVSQ7Z434 540 aa14.81□□□□□ -0.04
CUX1-215ENST00000556210 FAM45AQ8TCE6 357 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms