RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 IL1BP01584 269 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CAPNS1P04632 268 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CCDC166P0CW27 439 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TPBGLP0DKB5 382 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 ACADMP11310 421 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CHN1P15882 459 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CSRP1P21291 193 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NNMTP40261 264 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 MAGEA1P43355 309 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RXRGP48443 463 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NUMBP49757 651 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 AFF3P51826 1226 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NEK3P51956 506 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CDH6P55285 790 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PFN3P60673 137 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RACK1P63244 317 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 GBE1Q04446 702 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 KLF1Q13351 362 aaPredicted RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CUL1Q13616 776 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HNRNPDQ14103 355 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SPA17Q15506 151 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TSNAXIP1Q2TAA8 658 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TRIM61Q5EBN2 209 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PPP6R3Q5H9R7 873 aaPredicted RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SYCP2LQ5T4T6 812 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NAPEPLDQ6IQ20 393 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 ERMP1Q7Z2K6 904 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HORMAD1Q86X24 394 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RHOT1Q8IXI2 618 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RAVER1Q8IY67 606 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 DEFB119Q8N690 84 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CNTD1Q8N815 330 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 MFSD2AQ8NA29 543 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SMYD1Q8NB12 490 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NETO2Q8NC67 525 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 DENND6BQ8NEG7 585 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 EXD1Q8NHP7 514 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 FAM174AQ8TBP5 190 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 C17orf50Q8WW18 174 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 DYDC1Q8WWB3 177 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PIH1D2Q8WWB5 315 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 DNAJC9Q8WXX5 260 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 KRT35Q92764 455 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 FUBP1Q96AE4 644 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HES6Q96HZ4 224 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 COQ10AQ96MF6 247 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 AGAP3Q96P47 875 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 LYSMD1Q96S90 227 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 KRT12Q99456 494 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CCDC134Q9H6E4 229 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TOR4AQ9NXH8 423 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 DDX56Q9NY93 547 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SUSD2Q9UGT4 822 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HS3ST3A1Q9Y663 406 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 GPR179Q6PRD1 2367 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 LRRC72A6NJI9 287 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RAD51CO43502 376 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SOCS5O75159 536 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PEX11AO75192 247 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NDUFS2O75306 463 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 E2F6O75461 281 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RNASEH2AO75792 299 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PIGNO95427 931 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SHBGP04278 402 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HOXC4P09017 264 aaPredicted RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 MAOBP27338 520 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 ARL4AP40617 200 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 AP1S1P61966 158 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NIPAL4Q0D2K0 466 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SF3A3Q12874 501 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 MSLNQ13421 630 aaPredicted RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TMED1Q13445 227 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HLTFQ14527 1009 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PUM1Q14671 1186 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 MESDQ14696 234 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 HADHQ16836 314 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 KRT71Q3SY84 523 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TPRG1LQ5T0D9 272 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SEL1L3Q68CR1 1132 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 BRAT1Q6PJG6 821 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 MFSD7Q6UXD7 560 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 KYAT3Q6YP21 454 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SPOCD1Q6ZMY3 1216 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 DPPA4Q7L190 304 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PGBD3Q8N328 593 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 RNF10Q8N5U6 811 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 ENDOVQ8N8Q3 282 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SAP25Q8TEE9 199 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 PIGKQ92643 395 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 ALG3Q92685 438 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 TBATAQ96M53 351 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SLC6A18Q96N87 628 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SPON2Q9BUD6 331 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 EDEM2Q9BV94 578 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 NSRP1Q9H0G5 558 aaKnown RBP3.92□□□□□ -1.78
LINC00648-202ENST00000555985 IL21RQ9HBE5 538 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 SPATA7Q9P0W8 599 aa3.92□□□□□ -1.78
LINC00648-202ENST00000555985 CIDEBQ9UHD4 219 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms