RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ZNF354CQ86Y25 554 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF683Q8IZ20 524 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 LGI2Q8N0V4 545 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ELMOD1Q8N336 334 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 BBS5Q8N3I7 341 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 PPM1NQ8N819 430 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 DCAKDQ8WVC6 231 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SLC44A1Q8WWI5 657 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 TTC17Q96AE7 1141 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MTBPQ96DY7 904 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 PRMT1Q99873 361 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 WDR83Q9BRX9 315 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SGPP1Q9BX95 441 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 NSRP1Q9H0G5 558 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 CCDC134Q9H6E4 229 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 SP110Q9HB58 689 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 GLOD4Q9HC38 313 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ENTPD7Q9NQZ7 604 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 RBM22Q9NW64 420 aaKnown RBP eCLIP6.88□□□□□ -1.317e-6■■■□□ 17.4
SLIRP-204ENST00000555890 PLEKHB1Q9UF11 243 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF180Q9UJW8 692 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 G3BP2Q9UN86 482 aaKnown RBP6.88□□□□□ -1.31
SLIRP-204ENST00000555890 TTLL3Q9Y4R7 772 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 INSL5Q9Y5Q6 135 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 MGAQ8IWI9 3026 aa6.88□□□□□ -1.31
SLIRP-204ENST00000555890 OBSL1O75147 1896 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 FAM159BA6NKW6 160 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 EBAG9O00559 213 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 TEX28O15482 410 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 PRPF4O43172 522 aaKnown RBP eCLIP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 COCHO43405 550 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CACNG3O60359 315 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 RAMP2O60895 175 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CNTN5O94779 1100 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ALDH1A2O94788 518 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 HTR3BO95264 441 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CXCL14O95715 111 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 LRG1P02750 347 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 SNRPAP09012 282 aaKnown RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MBL2P11226 248 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 SRFP11831 508 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CNTFP26441 200 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CD68P34810 354 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 GRIA1P42261 906 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CDH4P55283 916 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ITKQ08881 620 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MGAT5Q09328 741 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MPP3Q13368 585 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 SPARCL1Q14515 664 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 C5orf22Q49AR2 442 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ALFQ53S48 1182 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 FAM182AQ5T1J6 154 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ARMC3Q5W041 872 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 STEAP4Q687X5 459 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 KCTD11Q693B1 232 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MRM1Q6IN84 353 aaKnown RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ADAMTSL4Q6UY14 1074 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ARHGAP36Q6ZRI8 547 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MICALCLQ6ZW33 695 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 TFAP2DQ7Z6R9 452 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 AGGF1Q8N302 714 aaeCLIP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MPP5Q8N3R9 675 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CNTD1Q8N815 330 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ANKRD42Q8N9B4 389 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 OR52K1Q8NGK4 314 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ZSCAN18Q8TBC5 510 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 AUTS2Q8WXX7 1259 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 IGSF8Q969P0 613 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 PSMG2Q969U7 264 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MOCOSQ96EN8 888 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CHMP6Q96FZ7 201 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 LOXL4Q96JB6 756 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 GCNAQ96QF7 691 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MYADMQ96S97 322 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CCT8L2Q96SF2 557 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 RPP25Q9BUL9 199 aaKnown RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MLPHQ9BV36 600 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-204ENST00000555890 OSBPL6Q9BZF3 934 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 IL22Q9GZX6 179 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 ZBP1Q9H171 429 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MAGEH1Q9H213 219 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CASS4Q9NQ75 786 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 SLC2A4RGQ9NR83 387 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 MOCS1Q9NZB8 636 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 TXNDC16Q9P2K2 825 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 EPS15L1Q9UBC2 864 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 FAM169AQ9Y6X4 670 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 HIVEP3Q5T1R4 2406 aa6.87□□□□□ -1.31
SLIRP-204ENST00000555890 CHD5Q8TDI0 1954 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 SPTBN1Q01082 2364 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CCDC163A0A0D9SF12 145 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 GOLGA6L7A0A1B0GV03 622 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 FAM237BA0A1B0GVD1 139 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 A0A1W2PPM1 405 aa6.86□□□□□ -1.31
SLIRP-204ENST00000555890 TYW5A2RUC4 315 aaKnown RBP6.86□□□□□ -1.31
SLIRP-204ENST00000555890 CLEC18AA5D8T8 446 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms