RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TSPAN14Q8NG11 270 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 GPR150Q8NGU9 434 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 RHEBL1Q8TAI7 183 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 HMGCLL1Q8TB92 370 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 BLOC1S5Q8TDH9 187 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.99□□□□□ -1.29
TDP1-213ENST00000555880 RMND5BQ96G75 393 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 SLC39A13Q96H72 371 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 FUBP3Q96I24 572 aaKnown RBP eCLIP6.99□□□□□ -1.29
TDP1-213ENST00000555880 FEM1CQ96JP0 617 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 CCT7Q99832 543 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TMEM79Q9BSE2 394 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 SLC2A11Q9BYW1 496 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 CCDC68Q9H2F9 335 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TNFRSF12AQ9NP84 129 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MID1IP1Q9NPA3 183 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 PFDN4Q9NQP4 134 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 PNPLA3Q9NST1 481 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 OLA1Q9NTK5 396 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 CATSPERZQ9NTU4 200 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.99□□□□□ -1.29
TDP1-213ENST00000555880 MARCH4Q9P2E8 410 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 CD300AQ9UGN4 299 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 CNOT6Q9ULM6 557 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 MYRFQ9Y2G1 1151 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 ANKRD36A6QL64 1941 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 BPTFQ12830 3046 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TTC3P53804 2025 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 LOC285095A0A1B0GVY8 99 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ZNF839A8K0R7 811 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CCL22O00626 93 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 VILLO15195 856 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 HNRNPRO43390 633 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 LDB2O43679 373 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TMCC1O94876 653 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 WISP3O95389 354 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 H6PDO95479 791 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CHEK2O96017 543 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ALDH1A1P00352 501 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GOT2P00505 430 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 ITGB1P05556 798 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MMP2P08253 660 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 FGF4P08620 206 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 IDO1P14902 403 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CD1DP15813 335 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TSPAN8P19075 237 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 HDCP19113 662 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 OGNP20774 298 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 IL10P22301 178 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GPX3P22352 226 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GRIA3P42263 894 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PGFP49763 221 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ARSDP51689 593 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 NAA20P61599 178 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TNK2Q07912 1038 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 FOXM1Q08050 763 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CRHR2Q13324 411 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 MTA1Q13330 715 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 BIRC2Q13490 618 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GK3PQ14409 553 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TRIP4Q15650 581 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 PFKFB4Q16877 469 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 UNC50Q53HI1 259 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TBCELQ5QJ74 424 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 C6orf10Q5SRN2 563 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CD300LGQ6UXG3 332 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ISLR2Q6UXK2 745 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 EFL1Q7Z2Z2 1120 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 ARHGAP22Q7Z5H3 698 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 METTL25Q8N6Q8 603 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PACRGLQ8N7B6 248 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GOLM1Q8NBJ4 401 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 OR9I1Q8NGQ6 314 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TWIST2Q8WVJ9 160 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ZUFSPQ96AP4 578 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TUBGCP3Q96CW5 907 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 C8orf48Q96LL4 319 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TBATAQ96M53 351 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 RPRD1AQ96P16 312 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 UHRF1Q96T88 793 aaPredicted RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 TCF12Q99081 682 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 CIB1Q99828 191 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SEMA3CQ99985 751 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 ZCWPW1Q9H0M4 648 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TFB2MQ9H5Q4 396 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 NOL11Q9H8H0 719 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 SYTL2Q9HCH5 934 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 TIMMDC1Q9NPL8 285 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 INTS10Q9NVR2 710 aaKnown RBP6.98□□□□□ -1.29
TDP1-213ENST00000555880 ARMC1Q9NVT9 282 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 GMIPQ9P107 970 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 RNF112Q9ULX5 631 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 NOD1Q9Y239 953 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 PCDHB5Q9Y5E4 795 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 DNAJC15Q9Y5T4 150 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 SQORQ9Y6N5 450 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 IGLV3-10A0A075B6K4 115 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 DHRS12A0PJE2 317 aa6.98□□□□□ -1.29
TDP1-213ENST00000555880 OR51F1A6NGY5 319 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms