RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DDX5P17844 614 aaKnown RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 KRT9P35527 623 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 USP8P40818 1118 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 METAP2P50579 478 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNX6-204ENST00000555541 CDH15P55291 814 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 HNRNPH2P55795 449 aaKnown RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 LMO4P61968 165 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 GNB1P62873 340 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 RNPS1Q15287 305 aaKnown RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 C2orf68Q2NKX9 166 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 ZNF876PQ49A33 203 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 IRAK1BP1Q5VVH5 260 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 RGMBQ6NW40 437 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 FBXO46Q6PJ61 603 aaPredicted RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 SLC22A25Q6T423 547 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 SH2D6Q7Z4S9 175 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 CTAGE4Q8IX94 777 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 ZBTB2Q8N680 514 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 CADM4Q8NFZ8 388 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 CDCA5Q96FF9 252 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 LBHD1Q9BQE6 289 aaPredicted RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 PYGO2Q9BRQ0 406 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 LRRC1Q9BTT6 524 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 MOV10L1Q9BXT6 1211 aaKnown RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 MMP25Q9NPA2 562 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 TMEM160Q9NX00 188 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 FBXO9Q9UK97 447 aaPredicted RBP3.42□□□□□ -1.86
SNX6-204ENST00000555541 AMDHD2Q9Y303 409 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 A0A1W2PNU3 283 aaPredicted RBP3.41□□□□□ -1.86
SNX6-204ENST00000555541 IFNL4K9M1U5 179 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 RRM1P23921 792 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 DDIT3P35638 169 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 HALP42357 657 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 HSD17B4P51659 736 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 PPP2R5BQ15173 497 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 SLC1A5Q15758 541 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 SLC45A4Q5BKX6 768 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 TRNP1Q6NT89 227 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 KCTD18Q6PI47 426 aaPredicted RBP3.41□□□□□ -1.86
SNX6-204ENST00000555541 LRRTM4Q86VH4 590 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 TDRPQ86YL5 185 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 ADAD2Q8NCV1 583 aaKnown RBP3.41□□□□□ -1.86
SNX6-204ENST00000555541 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 OR10V1Q8NGI7 309 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 HUS1BQ8NHY5 278 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 SH3GL2Q99962 352 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 HERPUD2Q9BSE4 406 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 PLEKHA4Q9H4M7 779 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 PADI1Q9ULC6 663 aa3.41□□□□□ -1.86
SNX6-204ENST00000555541 IRF1P10914 325 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 MYOD1P15172 320 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 CCNYL2Q5T2Q4 361 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 METTL2BQ6P1Q9 378 aaKnown RBP3.4□□□□□ -1.87
SNX6-204ENST00000555541 RRM2BQ7LG56 351 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 ANKRD18AQ8IVF6 992 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 RNF113BQ8IZP6 322 aaKnown RBP3.4□□□□□ -1.87
SNX6-204ENST00000555541 SPATA6LQ8N4H0 392 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 ZCCHC10Q8TBK6 192 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 TRIM63Q969Q1 353 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 METTL2AQ96IZ6 378 aaKnown RBP3.4□□□□□ -1.87
SNX6-204ENST00000555541 ATOH8Q96SQ7 321 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 PCYT2Q99447 389 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 FAM110AQ9BQ89 295 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 FUZQ9BT04 418 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 GLIS2Q9BZE0 524 aaPredicted RBP3.4□□□□□ -1.87
SNX6-204ENST00000555541 GPR63Q9BZJ6 419 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 TKTL2Q9H0I9 626 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 PPP1R3EQ9H7J1 279 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 GPR108Q9NPR9 543 aa3.4□□□□□ -1.87
SNX6-204ENST00000555541 HINT3Q9NQE9 182 aaKnown RBP3.4□□□□□ -1.87
SNX6-204ENST00000555541 TEX13CA0A0J9YWL9 993 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 EIF3FO00303 357 aaPredicted RBP3.39□□□□□ -1.87
SNX6-204ENST00000555541 BDKRB2P30411 391 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 CORO1AP31146 461 aaKnown RBP3.39□□□□□ -1.87
SNX6-204ENST00000555541 GNL1P36915 607 aaPredicted RBP3.39□□□□□ -1.87
SNX6-204ENST00000555541 GABRB2P47870 512 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 UFM1P61960 85 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 NAA35Q5VZE5 725 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 GGNBP1Q5YKI7 109 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 HIST2H2BDQ6DRA6 164 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 SLC35E4Q6ICL7 350 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 QSOX2Q6ZRP7 698 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 ASB18Q6ZVZ8 466 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 KCTD8Q6ZWB6 473 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 TMEM190Q8WZ59 177 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 SLC41A2Q96JW4 573 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 ZNF583Q96ND8 569 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 DCTN5Q9BTE1 182 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 H2AFJQ9BTM1 129 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 NDST4Q9H3R1 872 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 KCNK7Q9Y2U2 307 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 PRSS21Q9Y6M0 314 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 SCINQ9Y6U3 715 aa3.39□□□□□ -1.87
SNX6-204ENST00000555541 SMCHD1A6NHR9 2005 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 NR5A2O00482 541 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 FTCDO95954 541 aa3.38□□□□□ -1.87
SNX6-204ENST00000555541 IFIT1P09914 478 aaKnown RBP3.38□□□□□ -1.87
SNX6-204ENST00000555541 COX7A2P14406 83 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms