RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 MED4Q9NPJ6 270 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 C2orf42Q9NWW7 574 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 CUL9Q8IWT3 2517 aa10.18□□□□□ -0.78
NEK9-205ENST00000555405 CABIN1Q9Y6J0 2220 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 FAM159BA6NKW6 160 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 FZD6O60353 706 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CYP2A6P11509 494 aaPredicted RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 BPIP17213 487 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 DRD1P21728 446 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 FAM46CQ5VWP2 391 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ERN2Q76MJ5 926 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 RELL1Q8IUW5 271 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ZNF398Q8TD17 642 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CXorf40AQ8TE69 158 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 SNX19Q92543 992 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 VPS39Q96JC1 886 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 SERAC1Q96JX3 654 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 RIOK2Q9BVS4 552 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 CPEB1Q9BZB8 566 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 FZD3Q9NPG1 666 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ZNF358Q9NW07 568 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 HACD3Q9P035 362 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 IL17CQ9P0M4 197 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 COMMD10Q9Y6G5 202 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TRPM6Q9BX84 2022 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ABCA7Q8IZY2 2146 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 GLYATL1P3A0A0U1RQE8 302 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ADAM23O75077 832 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 SRP72O76094 671 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 ITGA2BP08514 1039 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 PBLDP30039 288 aaPredicted RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 EIF2DP41214 584 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 PTSQ03393 145 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 SEMA3AQ14563 771 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 RNF43Q68DV7 783 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 TUBGCP5Q96RT8 1024 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 STMN4Q9H169 189 aaPredicted RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 MAGEE1Q9HCI5 957 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ACSS2Q9NR19 701 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 OGFRQ9NZT2 677 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TLK1Q9UKI8 766 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 PPM1HQ9ULR3 514 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 SORCS3Q9UPU3 1222 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ANKRD36A6QL64 1941 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 MIA3Q5JRA6 1907 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 KRBA1A5PL33 1030 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 IGLON5A6NGN9 336 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CAPN8A6NHC0 703 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TPP1O14773 563 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ADRB3P13945 408 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 HNRNPLP14866 589 aaKnown RBP eCLIP10.17□□□□□ -0.78
NEK9-205ENST00000555405 ITGALP20701 1170 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 HADHAP40939 763 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CD151P48509 253 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 NEK3P51956 506 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 RAET1GQ6H3X3 334 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 KIAA0930Q6ICG6 404 aaPredicted RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 TRIM67Q6ZTA4 783 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TAOK1Q7L7X3 1001 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 ADHFE1Q8IWW8 467 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TTC30BQ8N4P2 665 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.17□□□□□ -0.78
NEK9-205ENST00000555405 TADA1Q96BN2 335 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 AP2M1Q96CW1 435 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 BOCQ9BWV1 1114 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 FAM83DQ9H4H8 585 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 IL26Q9NPH9 171 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CPSF2Q9P2I0 782 aaKnown RBP10.17□□□□□ -0.78
NEK9-205ENST00000555405 SLC24A2Q9UI40 661 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 MUC3AQ02505 3323 aa10.17□□□□□ -0.78
NEK9-205ENST00000555405 CHD5Q8TDI0 1954 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 TMEM120BA0PK00 339 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 E5RI56 91 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 COPEO14579 308 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 RHOBTB1O94844 696 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 PAPLNO95428 1278 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 GABRB3P28472 473 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ATP5DP30049 168 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 P2RY2P41231 377 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 TNFRSF4P43489 277 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 DGKEP52429 567 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 GUCY1A3Q02108 690 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ZP2Q05996 745 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 ZNF776Q68DI1 518 aaPredicted RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 PTRHD1Q6GMV3 140 aaKnown RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 SERPINA9Q86WD7 417 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 GJD3Q8N144 294 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 GABPB2Q8TAK5 448 aaPredicted RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 CALML6Q8TD86 181 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 CD320Q9NPF0 282 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 TREX1Q9NSU2 369 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 NKIRAS1Q9NYS0 192 aa10.16□□□□□ -0.78
NEK9-205ENST00000555405 HELZP42694 1942 aaKnown RBP10.16□□□□□ -0.78
NEK9-205ENST00000555405 FAM95CA0A1B0GW59 222 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms