RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZRANB2O95218 330 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 LPLP06858 475 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PRLRP16471 622 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 GOT1P17174 413 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 TACR2P21452 398 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 SP100P23497 879 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 HOXC13P31276 330 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PTPN7P35236 360 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 SLC11A2P49281 568 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 SGSHP51688 502 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 VCPP55072 806 aaKnown RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 TFF2Q03403 129 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 NFATC3Q12968 1075 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 MTA1Q13330 715 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 HTR4Q13639 388 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 DPYSQ14117 519 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 KRT81Q14533 505 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PDK2Q15119 407 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 LLGL1Q15334 1064 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 C5orf22Q49AR2 442 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PPP6R3Q5H9R7 873 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 GRAMD4Q6IC98 578 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 FBXL22Q6P050 247 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PARM1Q6UWI2 310 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 VITQ6UXI7 678 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 CHSY1Q86X52 802 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 CIR1Q86X95 450 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 VSIG1Q86XK7 387 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 LGI2Q8N0V4 545 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PQLC3Q8N755 202 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 KCTD6Q8NC69 237 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 C1orf162Q8NEQ5 155 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 BPIFB1Q8TDL5 484 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 NKD2Q969F2 451 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 IGSF8Q969P0 613 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 RBM41Q96IZ5 413 aaKnown RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 MS4A14Q96JA4 679 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PBKQ96KB5 322 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PRICKLE1Q96MT3 831 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 CSPG4P5Q96PW8 444 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 RNF157Q96PX1 679 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 KXD1Q9BQD3 176 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF670Q9BS34 389 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 RPP25Q9BUL9 199 aaKnown RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PHF7Q9BWX1 381 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 CARD9Q9H257 536 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 LINC00597Q9H2U6 94 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 L2HGDHQ9H9P8 463 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ZFP14Q9HCL3 533 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 CCM2LQ9NUG4 571 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ETNK2Q9NVF9 386 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 OBP2AQ9NY56 170 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 SMARCAL1Q9NZC9 954 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF212Q9UDV6 495 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 FTSJ1Q9UET6 329 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 Q9UFV3 132 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 LSM7Q9UK45 103 aaKnown RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 VANGL2Q9ULK5 521 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF510Q9Y2H8 683 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 MFHAS1Q9Y4C4 1052 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA9Q9Y5G4 932 aaKnown RBP6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA8Q9Y5G5 932 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA7Q9Y5G6 932 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA6Q9Y5G7 932 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA3Q9Y5H0 932 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 PCDHGA2Q9Y5H1 932 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 WNT6Q9Y6F9 365 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 F5P12259 2224 aa6.44□□□□□ -1.38
SCFD1-212ENST00000554486 MIA3Q5JRA6 1907 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TRIOO75962 3097 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TCRBV7S2A1N4TA0A589 114 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 F5H5T6 163 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 EEF2KO00418 725 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CES2O00748 559 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 DCLK1O15075 740 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CREB3O43889 395 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CEP104O60308 925 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 NOBOXO60393 691 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TSPAN3O60637 253 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ECI2O75521 394 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CNTN5O94779 1100 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 KRT10P13645 584 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ARSAP15289 507 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TCP1P17987 556 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ERCC2P18074 760 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 EPHB2P29323 1055 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CSF2RBP32927 897 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 HTR7P34969 479 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 HCAR3P49019 387 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF135P52742 658 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TPI1P60174 286 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 RPS24P62847 133 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 FCHO2Q0JRZ9 810 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 PCBP2Q15366 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ALFQ53S48 1182 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ANKRD20A8PQ5CZ79 823 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TFDP3Q5H9I0 405 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 SEL1L2Q5TEA6 688 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms