RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SH2D5Q6ZV89 423 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ANO5Q75V66 913 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MARK2Q7KZI7 788 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ARHGAP22Q7Z5H3 698 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DHDDSQ86SQ9 333 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 EGFL6Q8IUX8 553 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TRIM48Q8IWZ4 208 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 KIAA2013Q8IYS2 634 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ULK2Q8IYT8 1036 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CISD2Q8N5K1 135 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MRPL43Q8N983 215 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DRAXINQ8NBI3 349 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TTC8Q8TAM2 541 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 GSDMBQ8TAX9 411 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ACTL9Q8TC94 416 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TRPC4APQ8TEL6 797 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DDI1Q8WTU0 396 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 FAM172AQ8WUF8 416 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CDKL2Q92772 493 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 AZIN2Q96A70 460 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ZBTB10Q96DT7 871 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 FAM167AQ96KS9 214 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CASD1Q96PB1 797 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MCEEQ96PE7 176 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SYT15Q9BQS2 421 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 HERPUD2Q9BSE4 406 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 TMEM121Q9BTD3 319 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 MSTO1Q9BUK6 570 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SPATA16Q9BXB7 569 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 POLR3FQ9H1D9 316 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SMOC2Q9H3U7 446 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 NRDE2Q9H7Z3 1164 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 KCNK13Q9HB14 408 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 CYP3A43Q9HB55 503 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ARL8BQ9NVJ2 186 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DNAJC28Q9NX36 388 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 SPG21Q9NZD8 308 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 C6orf203Q9P0P8 240 aaPredicted RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DCDC2Q9UHG0 476 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 GRID1Q9ULK0 1009 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 PADI4Q9UM07 663 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 PRPF19Q9UMS4 504 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 DUSP12Q9UNI6 340 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 ST3GAL5Q9UNP4 418 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 GINS2Q9Y248 185 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 GMEB1Q9Y692 573 aa5.99□□□□□ -1.45
VPS33B-203ENST00000554264 RIF1Q5UIP0 2472 aaKnown RBP5.99□□□□□ -1.45
VPS33B-203ENST00000554264 PLXNA4Q9HCM2 1894 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KAT6AQ92794 2004 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 COL1A2P08123 1366 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TISP43B9A030 160 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 H0YJX3 145 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 AP3B1O00203 1094 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CASQ2O14958 399 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 HBP1O60381 514 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TRIM13O60858 407 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CLASP2O75122 1294 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 SKAP2O75563 359 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TOM1L1O75674 476 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 RFPL3O75679 317 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KRT36O76013 467 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ENDOD1O94919 500 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 VNN1O95497 513 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 APOEP02649 317 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 APOA4P06727 396 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 BPGMP07738 259 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 SETSIPP0DME0 302 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 RBP3P10745 1247 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 KRT10P13645 584 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 UQCRBP14927 111 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ALOX15P16050 662 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PROZP22891 400 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 SSTR1P30872 391 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ATICP31939 592 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 GJC1P36383 396 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 HADHAP40939 763 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 GABRB2P47870 512 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 NR2C2P49116 596 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 COPAP53621 1224 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CRYBB1P53674 252 aaPredicted RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 NLRP11P59045 1033 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 YWHAGP61981 247 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 BASP1P80723 227 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PPARDQ03181 441 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 BTKQ06187 659 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 ILF2Q12905 390 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 STX3Q13277 289 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TRPC3Q13507 836 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 LAMB3Q13751 1172 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 FRG1Q14331 258 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 FASTKD3Q14CZ7 662 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 EMC2Q15006 297 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 TCEA2Q15560 299 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CCDC153Q494R4 210 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 CCDC14Q49A88 953 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PRR31Q5SQ13 230 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 RARS2Q5T160 578 aaKnown RBP5.98□□□□□ -1.45
VPS33B-203ENST00000554264 PHF19Q5T6S3 580 aa5.98□□□□□ -1.45
VPS33B-203ENST00000554264 FAXCQ5TGI0 409 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms