RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 HOXC4P09017 264 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 MIPP30301 263 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ETV5P41161 510 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ETV3P41162 512 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ACTR1BP42025 376 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 GPR1P46091 355 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ACTR1AP61163 376 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 NSUN2Q08J23 767 aaKnown RBP eCLIP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 SRSF6Q13247 344 aaKnown RBP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 KRT81Q14533 505 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 CNGA3Q16281 694 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 OCLNQ16625 522 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 SMTNL2Q2TAL5 461 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ARMC12Q5T9G4 340 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 AFMIDQ63HM1 303 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 KCTD16Q68DU8 428 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ATG14Q6ZNE5 492 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 PSTKQ8IV42 348 aaKnown RBP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 SFTPA2Q8IWL1 248 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 NRSN1Q8IZ57 195 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 NPWQ8N729 165 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 RCBTB1Q8NDN9 531 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 RNF166Q96A37 237 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 COL26A1Q96A83 441 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 VOPP1Q96AW1 172 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ECHDC3Q96DC8 303 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 CCDC74BQ96LY2 380 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ZNF599Q96NL3 588 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 PSKH2Q96QS6 385 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ERGIC2Q96RQ1 377 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 PEBP4Q96S96 227 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 LGR4Q9BXB1 951 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.9□□□□□ -0.82
ACTN1-208ENST00000553370 KCNK4Q9NYG8 393 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 TAS2R14Q9NYV8 317 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 EGFL7Q9UHF1 273 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 ACSL6Q9UKU0 697 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 SUFUQ9UMX1 484 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 PCDHGC4Q9Y5F7 938 aa9.9□□□□□ -0.82
ACTN1-208ENST00000553370 UBR5O95071 2799 aaPredicted RBP9.9□□□□□ -0.83
ACTN1-208ENST00000553370 TCRBV5S1A1TA0A578 114 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 LRRC53A6NM62 1247 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 ESPNB1AK53 854 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 HGSO14964 777 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 HEXIM1O94992 359 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 ASMTLO95671 621 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 ECEL1O95672 775 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 MYBL1P10243 752 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 CTPS1P17812 591 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 CA4P22748 312 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 AK4P27144 223 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 GJC1P36383 396 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 MMP13P45452 471 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 MAPK9P45984 424 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 CDH6P55285 790 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 CDK3Q00526 305 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 NFKB2Q00653 900 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 KLHL30Q0D2K2 578 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 SLC10A7Q0GE19 358 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 C16orf72Q14CZ0 275 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 TDRD12Q587J7 1177 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 SNAP47Q5SQN1 464 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 XKR5Q6UX68 686 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 MARK2Q7KZI7 788 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 GALNT13Q8IUC8 556 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 SLITRK4Q8IW52 837 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 ARHGAP12Q8IWW6 846 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 AGBL5Q8NDL9 886 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 KIAA1143Q96AT1 154 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 AP2M1Q96CW1 435 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 DTD2Q96FN9 168 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 COQ10AQ96MF6 247 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 OR2M4Q96R27 311 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 NUDCD1Q96RS6 583 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 NUDT22Q9BRQ3 303 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 SPATS2LQ9NUQ6 558 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 TRNAU1APQ9NX07 287 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 CWC15Q9P013 229 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 CD84Q9UIB8 345 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 MYO6Q9UM54 1294 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 PHTF1Q9UMS5 762 aa9.89□□□□□ -0.83
ACTN1-208ENST00000553370 PRRC2CQ9Y520 2896 aaKnown RBP9.89□□□□□ -0.83
ACTN1-208ENST00000553370 SPTAN1Q13813 2472 aaKnown RBP9.88□□□□□ -0.83
ACTN1-208ENST00000553370 NPIPB15A6NHN6 443 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-208ENST00000553370 TRAFD1O14545 582 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-208ENST00000553370 DUX1O43812 170 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 LRCH4O75427 683 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 FTLP02792 175 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-208ENST00000553370 ATP1A3P13637 1013 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 MAN1A1P33908 653 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 TRIM23P36406 574 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 GPR3P46089 330 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 CSRP3P50461 194 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 MAXP61244 160 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 CYP4F2P78329 520 aa9.88□□□□□ -0.83
ACTN1-208ENST00000553370 CTBSQ01459 385 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms