RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 GTF2A1P52655 376 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 AP1S1P61966 158 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PEX6Q13608 980 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RCN1Q15293 331 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 OR4D1Q15615 310 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 UNC50Q53HI1 259 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 MPP7Q5T2T1 576 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 TMEM198Q66K66 360 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PSAPL1Q6NUJ1 521 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RETSATQ6NUM9 610 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PAQR3Q6TCH7 311 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RIPOR1Q6ZS17 1223 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 BBS7Q8IWZ6 715 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 FIBCD1Q8N539 461 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 USP13Q92995 863 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CATSPER2Q96P56 530 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PANX3Q96QZ0 392 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 TACO1Q9BSH4 297 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 BPIFA1Q9NP55 256 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 TNFRSF12AQ9NP84 129 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 TRAV19A0A0A6YYK7 116 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 PFDN6O15212 129 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 CCNT2O60583 730 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 SUPT7LO94864 414 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 C8AP07357 584 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 GCKP35557 465 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 TTPAP49638 278 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 EPHB1P54762 984 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ACTR3P61158 418 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 HERVK_113P63132 956 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 BTKQ06187 659 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 PTPRNQ16849 979 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 MPPE1Q53F39 396 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ARMC12Q5T9G4 340 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 PGM2L1Q6PCE3 622 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 KIRREL3Q8IZU9 778 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 CEP70Q8NHQ1 597 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 RP9Q8TA86 221 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 KIAA1191Q96A73 305 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ACDQ96AP0 544 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 FAM136AQ96C01 138 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 BIRC8Q96P09 236 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ATOH8Q96SQ7 321 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ERVK-6Q9BXR3 956 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 DERL2Q9GZP9 239 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 MEAF6Q9HAF1 191 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 MAGEE1Q9HCI5 957 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 IL23AQ9NPF7 189 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 STOML1Q9UBI4 398 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 ZNF711Q9Y462 761 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 TRAF6Q9Y4K3 522 aa13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 OAS3Q9Y6K5 1087 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-216ENST00000552199 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 UBXN8O00124 270 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 NRG2O14511 850 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 UBFD1O14562 309 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 SMAD6O43541 496 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 PGLSO95336 258 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 MTHFD2P13995 350 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 PKMP14618 531 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 CD1EP15812 388 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 CD9P21926 228 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 PTDSS1P48651 473 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 HTRA4P83105 476 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 RAD51Q06609 339 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 HERC3Q15034 1050 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 CCDC6Q16204 474 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 RAB44Q7Z6P3 723 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 SNX32Q86XE0 403 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 DEFB107AQ8IZN7 70 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 ELMOD1Q8N336 334 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 PTGR2Q8N8N7 351 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 KLHL23Q8NBE8 558 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 KREMEN2Q8NCW0 462 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 PIH1D2Q8WWB5 315 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 EXT2Q93063 718 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 MYO19Q96H55 970 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 TM6SF2Q9BZW4 377 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 IL17CQ9P0M4 197 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 KIAA1522Q9P206 1035 aaPredicted RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 STX18Q9P2W9 335 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 MCM8Q9UJA3 840 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 FIS1Q9Y3D6 152 aa13.96□□□□□ -0.17
RAB3IP-216ENST00000552199 A0A0U1RQS6 177 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 A0A1W2PRU2 124 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 SKAP2O75563 359 aaPredicted RBP13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 PRAMEF12O95522 483 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 PYGLP06737 847 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 ADH1AP07327 375 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 GJA1P17302 382 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 CSNK1DP48730 415 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 CLCN4P51793 760 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 INHBCP55103 352 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 ATP6V0D1P61421 351 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 XIAPP98170 497 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms