RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ANXA9O76027 345 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 SOD1P00441 154 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 CDK4P11802 303 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 CKMT2P17540 419 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 GPR1P46091 355 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 SPINT3P49223 89 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ACADVLP49748 655 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 GEMP55040 296 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ILKQ13418 452 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 PRRT3Q5FWE3 981 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ANKRD20A2Q5SQ80 823 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ANKRD20A1Q5TYW2 823 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ANKRD20A3Q5VUR7 823 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ZCCHC8Q6NZY4 707 aaKnown RBP15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 LYSMD3Q7Z3D4 306 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 RAB44Q7Z6P3 723 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 SLC13A5Q86YT5 568 aaPredicted RBP15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 HID1Q8IV36 788 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 SDR16C5Q8N3Y7 309 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 IPMKQ8NFU5 416 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 PDLIM2Q96JY6 352 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 CDH19Q9H159 772 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 TRABDQ9H4I3 376 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 CAAP1Q9H8G2 361 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 FGF22Q9HCT0 170 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 RAD18Q9NS91 495 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 EVA1BQ9NVM1 165 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 CD84Q9UIB8 345 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ZNF711Q9Y462 761 aa15.37■□□□□ 0.05
PRPF40B-211ENST00000551063 ARID1BQ8NFD5 2236 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 GOLGA6CA6NDK9 693 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 GOLGA6BA6NDN3 693 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 C5orf60A6NFR6 353 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 RFPL3O75679 317 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 TNFP01375 233 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 FGF1P05230 155 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 GOLGA6DP0CG33 693 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 ACP1P24666 158 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 DCDC1P59894 354 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 PRPSAP1Q14558 356 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 ELOCQ15369 112 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 HENMT1Q5T8I9 393 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 RFLNAQ6ZTI6 216 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 KDELC2Q7Z4H8 507 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 OR1E3Q8WZA6 343 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 SCAMP4Q969E2 229 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 TSACCQ96A04 125 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 RIOK2Q9BVS4 552 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 LGR4Q9BXB1 951 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 FSD1LQ9BXM9 530 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 FRMD8Q9BZ67 464 aaPredicted RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 FAM83DQ9H4H8 585 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 GOLGA6AQ9NYA3 693 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 NCKIPSDQ9NZQ3 722 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 HACD3Q9P035 362 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 KLK13Q9UKR3 277 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 R3HDM2Q9Y2K5 976 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 AAR2Q9Y312 384 aaKnown RBP15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
PRPF40B-211ENST00000551063 TCRBV7S2A1N4TA0A589 114 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 F5H423 210 aaPredicted RBP15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 GCATO75600 419 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 ANXA6P08133 673 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 CKMT1AP12532 417 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 CTSEP14091 401 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 PSMB4P28070 264 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 DAB2P98082 770 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 DNAJC3Q13217 504 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 C1orf61Q13536 156 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 SLC1A5Q15758 541 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 C6orf132Q5T0Z8 1188 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 LVRNQ6Q4G3 990 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 RD3Q7Z3Z2 195 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 TMC3Q7Z5M5 1100 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 KLHDC8BQ8IXV7 354 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 CHCHD4Q8N4Q1 142 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 PNPLA1Q8N8W4 532 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 CCDC110Q8TBZ0 833 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 ZCCHC14Q8WYQ9 949 aaKnown RBP15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 APOLD1Q96LR9 279 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 GORASP1Q9BQQ3 440 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 TLR10Q9BXR5 811 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 GPR63Q9BZJ6 419 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 CLPBQ9H078 707 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 SHOC2Q9UQ13 582 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 SLC17A4Q9Y2C5 497 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 SPO11Q9Y5K1 396 aa15.35■□□□□ 0.05
PRPF40B-211ENST00000551063 PRSS38A1L453 326 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 ZSCAN12O43309 604 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 IVLP07476 585 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 PIRTP0C851 137 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 HMGCLP35914 325 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 CHRNA4P43681 627 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 DUSP3P51452 185 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 DEFB133Q30KQ1 61 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 P3H1Q32P28 736 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 SIRPB2Q5JXA9 342 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 KCTD16Q68DU8 428 aa15.34■□□□□ 0.05
PRPF40B-211ENST00000551063 PDPK2PQ6A1A2 396 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms