RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TMEM198Q66K66 360 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 C15orf52Q6ZUT6 534 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 LRRC49Q8IUZ0 686 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 NELL1Q92832 810 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 FEM1AQ9BSK4 669 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 EMILIN2Q9BXX0 1053 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 FBXO44Q9H4M3 255 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 RCOR3Q9P2K3 495 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 PSME2Q9UL46 239 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 GTF2A1LQ9UNN4 478 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ZNF99A8MXY4 864 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 CTSKP43235 329 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 WNT3AP56704 352 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SPRED3Q2MJR0 410 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ERAP2Q6P179 960 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 FSTL5Q8N475 847 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 C10orf53Q8N6V4 93 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 CANT1Q8WVQ1 401 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SEC14L1Q92503 715 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 CD101Q93033 1021 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 TLR8Q9NR97 1041 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 PDP1Q9P0J1 537 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 CNOT6Q9ULM6 557 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 C17orf102A2RUQ5 167 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 AMHP03971 560 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 TYMPP19971 482 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 AZGP1P25311 298 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 TTPAP49638 278 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 OAZ1P54368 228 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SPIBQ01892 262 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 LSAMPQ13449 338 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SH3D19Q5HYK7 790 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 TLDC1Q6P9B6 456 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 PTCHD4Q6ZW05 846 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SH3BP5LQ7L8J4 393 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ARMC8Q8IUR7 673 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC34A3Q8N130 599 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 OR8H1Q8NGG4 311 aa15.78■□□□□ 0.12
RBFOX1-212ENST00000550418 ELOVL7A1L3X0 281 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC15A5A6NIM6 579 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 H3BMM5 538 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 AP2A1O95782 977 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 MAGEA8P43361 318 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 IST1P53990 364 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 MOGSQ13724 837 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 NDUFAF6Q330K2 333 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 NIPAL1Q6NVV3 410 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 A6NHS1 94 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 ZBTB14O43829 449 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 DNAJA2O60884 412 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 UGT2B4P06133 528 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 NCK1P16333 377 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 PSMA1P25786 263 aaKnown RBP15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 PHC1P78364 1004 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 MPP1Q00013 466 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 FAM83AQ86UY5 434 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 DPF3Q92784 378 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 TMEM159Q96B96 161 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 DIRAS2Q96HU8 199 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 PTBP2Q9UKA9 531 aaKnown RBP15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 PCDHGA10Q9Y5H3 936 aa15.77■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC22A1O15245 554 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 MFSD11O43934 449 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 NPHS1O60500 1241 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 CST3P01034 146 aaPredicted RBP15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 CHRNGP07510 517 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 DLDP09622 509 aaKnown RBP15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 OR56A5P0C7T3 313 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 PSMA3P25788 255 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 GPX6P59796 221 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 SLC18A2Q05940 514 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 UNC5BQ8IZJ1 945 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 PIK3C3Q8NEB9 887 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 SLC7A6OSQ96CW6 309 aaPredicted RBP15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 TMCO6Q96DC7 493 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 TINF2Q9BSI4 451 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 ELOVL4Q9GZR5 314 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 TRPV5Q9NQA5 729 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 CORO2BQ9UQ03 480 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 COQ4Q9Y3A0 265 aa15.77■□□□□ 0.11
RBFOX1-212ENST00000550418 A0A1W2PPW3 197 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 UBE2QL1A1L167 161 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 RECQL4O94761 1208 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 PBLDP30039 288 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 GRK4P32298 578 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 CDK18Q07002 472 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 HECTD2Q5U5R9 776 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 IQSEC1Q6DN90 963 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 RETSATQ6NUM9 610 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 LCLAT1Q6UWP7 414 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 CENPSQ8N2Z9 138 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 DMRTB1Q96MA1 342 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 B3GNT5Q9BYG0 378 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 MAFO75444 373 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 POLR2EP19388 210 aaKnown RBP15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 SLC25A52Q3SY17 297 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 AFTPHQ6ULP2 937 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 TMPRSS11AQ6ZMR5 421 aa15.76■□□□□ 0.11
RBFOX1-212ENST00000550418 ZC3H7AQ8IWR0 971 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms