RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 DFFAO00273 331 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 AXIN1O15169 862 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 ERCC2P18074 760 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 SLC6A2P23975 617 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 AXLP30530 894 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 ARSFP54793 590 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 OR52K2Q8NGK3 314 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 FIG4Q92562 907 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 ROPN1LQ96C74 230 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 BIRC7Q96CA5 298 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 HOPXQ9BPY8 73 aaPredicted RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 DKK3Q9UBP4 350 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 GREB1LQ9C091 1923 aaPredicted RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 LRRC14BA6NHZ5 514 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 CCRL2O00421 344 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 GSTA4O15217 222 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 CPNE6O95741 557 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 CRHBPP24387 322 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 MTHFRP42898 656 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 SLC1A2P43004 574 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 LEPRP48357 1165 aaKnown RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 CLK1P49759 484 aaKnown RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 AGAP9Q5VTM2 703 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 SPRED1Q7Z699 444 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 OR6P1Q8NGX9 317 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 RNF34Q969K3 372 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 MAELQ96JY0 434 aaKnown RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 ASPSCR1Q9BZE9 553 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 MINDY3Q9H8M7 445 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.1□□□□□ -0.47
VDR-208ENST00000550325 SLAMF8Q9P0V8 285 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 PCNTO95613 3336 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 VWA5AO00534 786 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 GPIP06744 558 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CPB1P15086 417 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 TGM1P22735 817 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CXCR3P49682 368 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 DIO3P55073 304 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CDH17Q12864 832 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CYP2U1Q7Z449 544 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 MFSD6LQ8IWD5 586 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 SLC7A14Q8TBB6 771 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CNIH3Q8TBE1 160 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 SLC22A17Q8WUG5 538 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 MLPHQ9BV36 600 aaPredicted RBP12.09□□□□□ -0.47
VDR-208ENST00000550325 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 MEAF6Q9HAF1 191 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CSADQ9Y600 493 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FADS2O95864 444 aaKnown RBP12.09□□□□□ -0.47
VDR-208ENST00000550325 TCF3P15923 654 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 ITGB6P18564 788 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FMO3P31513 532 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
VDR-208ENST00000550325 STXBP2Q15833 593 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 PDZD4Q76G19 769 aaPredicted RBP12.09□□□□□ -0.47
VDR-208ENST00000550325 SPATC1Q76KD6 591 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 DCBLD1Q8N8Z6 715 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 PPM1MQ96MI6 270 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FICDQ9BVA6 458 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 PDZD7Q9H5P4 517 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 SLCO3A1Q9UIG8 710 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 TIMM22Q9Y584 194 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FAM72CH0Y354 149 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 DPYSL4O14531 572 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 RBP5P82980 135 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CHRNB3Q05901 458 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 TUBA3CQ13748 450 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 CATSPEREQ5SY80 951 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FAM72AQ5TYM5 149 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 GLYATQ6IB77 296 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FAM72DQ6L9T8 149 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 FAM72BQ86X60 149 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.09□□□□□ -0.47
VDR-208ENST00000550325 LILRB4Q8NHJ6 448 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 EMID1Q96A84 441 aaPredicted RBP12.09□□□□□ -0.47
VDR-208ENST00000550325 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
VDR-208ENST00000550325 H0Y626 953 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 PLA2G6O60733 806 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 TRIM16O95361 564 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 DBTP11182 482 aaKnown RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 HADHAP40939 763 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 PSMD8P48556 350 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 HNRNPFP52597 415 aaKnown RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 ADIGQ0VDE8 80 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 CAMK2BQ13554 666 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 DAG1Q14118 895 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 AASDHQ4L235 1098 aaPredicted RBP12.08□□□□□ -0.47
VDR-208ENST00000550325 C6orf141Q5SZD1 244 aa12.08□□□□□ -0.47
VDR-208ENST00000550325 NAPEPLDQ6IQ20 393 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms