RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 C14orf28Q4W4Y0 310 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CERCAMQ5T4B2 595 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 PDZD3Q86UT5 571 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 NT5DC3Q86UY8 548 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 RFX6Q8HWS3 928 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 TC2NQ8N9U0 490 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CCDC74AQ96AQ1 378 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CCDC97Q96F63 343 aaPredicted RBP11.35□□□□□ -0.59
BEST3-209ENST00000548658 ATXN7L3BQ96GX2 97 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 HIC2Q96JB3 615 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 TMEM74Q96NL1 305 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 FRMD8Q9BZ67 464 aaPredicted RBP11.35□□□□□ -0.59
BEST3-209ENST00000548658 STRADBQ9C0K7 418 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CDH19Q9H159 772 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 ABCG8Q9H221 673 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 RAD18Q9NS91 495 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 LRIT1Q9P2V4 623 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 ENTPD2Q9Y5L3 495 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 RP1P56715 2156 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 CHD6Q8TD26 2715 aa11.35□□□□□ -0.59
BEST3-209ENST00000548658 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 CCDC187A0A096LP49 1063 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 A0A0A6YYK5 440 aaPredicted RBP11.34□□□□□ -0.59
BEST3-209ENST00000548658 C1orf232A0A0U1RR37 186 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 MTSS1O43312 755 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 TLX3O43711 291 aaPredicted RBP11.34□□□□□ -0.59
BEST3-209ENST00000548658 ZRANB2O95218 330 aaKnown RBP eCLIP11.34□□□□□ -0.59
BEST3-209ENST00000548658 CLDN7O95471 211 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 TNNT1P13805 278 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 CD86P42081 329 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 GNPDA1P46926 289 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 STC1P52823 247 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 BIRC2Q13490 618 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 LRP8Q14114 963 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 HLTFQ14527 1009 aaKnown RBP eCLIP11.34□□□□□ -0.59
BEST3-209ENST00000548658 TCEA2Q15560 299 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 SLC14A2Q15849 920 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 CLPPQ16740 277 aaPredicted RBP11.34□□□□□ -0.59
BEST3-209ENST00000548658 C3orf38Q5JPI3 329 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 RCOR2Q8IZ40 523 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 PELI3Q8N2H9 469 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 CNTD1Q8N815 330 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 LPCAT1Q8NF37 534 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 P3H4Q92791 437 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 SCAMP4Q969E2 229 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 TMEM159Q96B96 161 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
BEST3-209ENST00000548658 LIN37Q96GY3 246 aaPredicted RBP11.34□□□□□ -0.59
BEST3-209ENST00000548658 SLC46A1Q96NT5 459 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 OLFM3Q96PB7 478 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 DPH1Q9BZG8 443 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 SLC25A51Q9H1U9 297 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 LRRN3Q9H3W5 708 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 FAM83DQ9H4H8 585 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 SYNDIG1Q9H7V2 258 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
BEST3-209ENST00000548658 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 SATB2Q9UPW6 733 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 PCDHA13Q9Y5I0 950 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 ALG6Q9Y672 507 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 LRP4O75096 1905 aa11.34□□□□□ -0.59
BEST3-209ENST00000548658 B4DGG1 531 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 NOBOXO60393 691 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 RPLP0P05388 317 aaKnown RBP11.33□□□□□ -0.6
BEST3-209ENST00000548658 MMP2P08253 660 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 CCKBRP32239 447 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 CDKN2BP42772 138 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 TNNT3P45378 269 aaPredicted RBP11.33□□□□□ -0.6
BEST3-209ENST00000548658 SPINT3P49223 89 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 UCNP55089 124 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 CCL7P80098 99 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 SKOR1P84550 965 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 ZBTB17Q13105 803 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 IHHQ14623 411 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 TAZQ16635 292 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 QPCTQ16769 361 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 TEX44Q53QW1 395 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 TFDP3Q5H9I0 405 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 BROXQ5VW32 411 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 KCTD16Q68DU8 428 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 MFSD7Q6UXD7 560 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 NYAP1Q6ZVC0 841 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 TMTC1Q8IUR5 882 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 CCNJLQ8IV13 435 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 KATNAL2Q8IYT4 538 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 CCL4L1Q8NHW4 92 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 ZDHHC1Q8WTX9 485 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 TFB1MQ8WVM0 346 aaKnown RBP11.33□□□□□ -0.6
BEST3-209ENST00000548658 IMP4Q96G21 291 aaKnown RBP11.33□□□□□ -0.6
BEST3-209ENST00000548658 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 AGAP3Q96P47 875 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 PANX2Q96RD6 677 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 VAT1Q99536 393 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
BEST3-209ENST00000548658 RIOK2Q9BVS4 552 aaKnown RBP11.33□□□□□ -0.6
BEST3-209ENST00000548658 RMI1Q9H9A7 625 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms