RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 GOLGA8CPA6NN73 597 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 TAF4O00268 1085 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 TCEA3O75764 348 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 CLDN7O95471 211 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 NDST3O95803 873 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 CELA2BP08218 269 aaPredicted RBP15.27■□□□□ 0.04
SSH1-204ENST00000546697 PNLIPP16233 465 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 EPHB1P54762 984 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 GSDMDP57764 484 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 DYNLT1P63172 113 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 CDK18Q07002 472 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 KIF5AQ12840 1032 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 NR0B2Q15466 257 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 PDPK2PQ6A1A2 396 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 IGF2-ASQ6U949 168 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 KDELC1Q6UW63 502 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 RFLNAQ6ZTI6 216 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 TMC3Q7Z5M5 1100 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 SYCE1Q8N0S2 351 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 PAF1Q8N7H5 531 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 LPCAT1Q8NF37 534 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 HTR3CQ8WXA8 447 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 SCG3Q8WXD2 468 aaKnown RBP15.27■□□□□ 0.04
SSH1-204ENST00000546697 AP2M1Q96CW1 435 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 AGAP3Q96P47 875 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 OSBPL8Q9BZF1 889 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 VPS18Q9P253 973 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 ZMIZ1Q9ULJ6 1067 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 CNOT6Q9ULM6 557 aaKnown RBP15.27■□□□□ 0.04
SSH1-204ENST00000546697 CLCA2Q9UQC9 943 aa15.27■□□□□ 0.04
SSH1-204ENST00000546697 ACACAQ13085 2346 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 TRABD2BA6NFA1 517 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 NTN3O00634 580 aaPredicted RBP15.26■□□□□ 0.03
SSH1-204ENST00000546697 KRT37O76014 449 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 TARDBPQ13148 414 aaKnown RBP eCLIP15.26■□□□□ 0.03
SSH1-204ENST00000546697 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
SSH1-204ENST00000546697 C1orf61Q13536 156 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 NR1D2Q14995 579 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 GUSBP11Q6P575 273 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 NRROSQ86YC3 692 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 ZNF567Q8N184 647 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 IFI44Q8TCB0 444 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 ZCCHC14Q8WYQ9 949 aaKnown RBP15.26■□□□□ 0.03
SSH1-204ENST00000546697 SCAMP4Q969E2 229 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 C19orf43Q9BQ61 176 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 RAD18Q9NS91 495 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 FAM153AQ9UHL3 310 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 APPL1Q9UKG1 709 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 TTLL3Q9Y4R7 772 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 ADGRG1Q9Y653 693 aa15.26■□□□□ 0.03
SSH1-204ENST00000546697 A0A0U1RQS6 177 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 C1orf232A0A0U1RR37 186 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 NOBOXO60393 691 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 DXOO77932 396 aaKnown RBP15.25■□□□□ 0.03
SSH1-204ENST00000546697 MT-CYBP00156 380 aaPredicted RBP15.25■□□□□ 0.03
SSH1-204ENST00000546697 MT-CO3P00414 261 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 PYGMP11217 842 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 TNNT1P13805 278 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 CTSEP14091 401 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 JUPP14923 745 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 KAZNQ674X7 775 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 RAET1GQ6H3X3 334 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 SPATA22Q8NHS9 363 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 ACTL9Q8TC94 416 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 CEP41Q9BYV8 373 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 TMEM168Q9H0V1 697 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 TRABDQ9H4I3 376 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 CCDC86Q9H6F5 360 aaKnown RBP15.25■□□□□ 0.03
SSH1-204ENST00000546697 ZFYVE1Q9HBF4 777 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 MRPL40Q9NQ50 206 aaKnown RBP15.25■□□□□ 0.03
SSH1-204ENST00000546697 PKD2L2Q9NZM6 624 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 PADI4Q9UM07 663 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 ST14Q9Y5Y6 855 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 MYLKQ15746 1914 aa15.25■□□□□ 0.03
SSH1-204ENST00000546697 SCN8AQ9UQD0 1980 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 RP1P56715 2156 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 SRRM3A6NNA2 597 aaPredicted RBP15.24■□□□□ 0.03
SSH1-204ENST00000546697 GPR89AB7ZAQ6 455 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 DDX3YO15523 660 aaKnown RBP15.24■□□□□ 0.03
SSH1-204ENST00000546697 ARHGAP6O43182 974 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 TJP3O95049 919 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 GPR89BP0CG08 455 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 HMGCLP35914 325 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 GPR1P46091 355 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 MPP3Q13368 585 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 LRP8Q14114 963 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 HLTFQ14527 1009 aaKnown RBP eCLIP15.24■□□□□ 0.03
SSH1-204ENST00000546697 CERCAMQ5T4B2 595 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 LYSMD3Q7Z3D4 306 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 ZNF438Q7Z4V0 828 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 KIAA1328Q86T90 577 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
SSH1-204ENST00000546697 CCDC50Q8IVM0 306 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 CCHCR1Q8TD31 782 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 NXPE2Q96DL1 559 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 OXNAD1Q96HP4 312 aaPredicted RBP15.24■□□□□ 0.03
SSH1-204ENST00000546697 HIC2Q96JB3 615 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 MRGPRX2Q96LB1 330 aa15.24■□□□□ 0.03
SSH1-204ENST00000546697 PLEKHG4BQ96PX9 1271 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms