RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 U3KQE9 123 aa6.38□□□□□ -1.39
PRKDC-211ENST00000546304 DNAH14Q0VDD8 3507 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 RALGAPA1Q6GYQ0 2036 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 TSPAN11A1L157 253 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 F5H423 210 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 SLC7A4O43246 635 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF217O75362 1048 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 RNASEH2AO75792 299 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 GAS8O95995 478 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 IFNB1P01574 187 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 MMP2P08253 660 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 SERPINF2P08697 491 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 SP9P0CG40 484 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CA4P22748 312 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PSMB4P28070 264 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 SLC8A1P32418 973 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CD86P42081 329 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PAFAH1B1P43034 410 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 FNTBP49356 437 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 TPMTP51580 245 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 NEK3P51956 506 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ADPRHP54922 357 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CKAP4Q07065 602 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 BCL2L1Q07817 233 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 NIPAL4Q0D2K0 466 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CNTN1Q12860 1018 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 TRAF2Q12933 501 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 SLC14A2Q15849 920 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 P3H1Q32P28 736 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF528Q3MIS6 628 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF805Q5CZA5 627 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 LRRC73Q5JTD7 316 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 FAM182AQ5T1J6 154 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PIP5KL1Q5T9C9 394 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 TTC27Q6P3X3 843 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 NCEH1Q6PIU2 408 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 BRAT1Q6PJG6 821 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 GDPD4Q6W3E5 623 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ARHGEF18Q6ZSZ5 1173 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 USP30Q70CQ3 517 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CBLL1Q75N03 491 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ERN2Q76MJ5 926 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 KBTBD6Q86V97 674 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 WDR5BQ86VZ2 330 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 LONP2Q86WA8 852 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CAMK1DQ8IU85 385 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PAF1Q8N7H5 531 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PRSS33Q8NF86 280 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ARRDC2Q8TBH0 407 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 GANCQ8TET4 914 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 NELL1Q92832 810 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 MAGOHBQ96A72 148 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 FAM131CQ96AQ9 280 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ARRDC3Q96B67 414 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ECHDC3Q96DC8 303 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 IMP4Q96G21 291 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF641Q96N77 438 aaPredicted RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 KLHL32Q96NJ5 620 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PRRX2Q99811 253 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 TDRD1Q9BXT4 1180 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 CPEB1Q9BZB8 566 aaKnown RBP6.37□□□□□ -1.39
PRKDC-211ENST00000546304 MIR1-1HGQ9H1L0 117 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 SLC25A51Q9H1U9 297 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 USP29Q9HBJ7 922 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 GLOD4Q9HC38 313 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PCDH9Q9HC56 1237 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 FBXL12Q9NXK8 326 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 DKK3Q9UBP4 350 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 RNF14Q9UBS8 474 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 FZD4Q9ULV1 537 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ZNF148Q9UQR1 794 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 PCDHGA2Q9Y5H1 932 aa6.37□□□□□ -1.39
PRKDC-211ENST00000546304 ZFHX2Q9C0A1 2572 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 IGHV1OR15-9A0A0B4J2B8 117 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PRAMEF27A3QJZ7 478 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 C5orf60A6NFR6 353 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 C16orf96A6NNT2 1141 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 UPK3BL1B0FP48 263 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 UPK3BL2E5RIL1 263 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 CCDC188H7C350 402 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PLK4O00444 970 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 TRAFD1O14545 582 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 HTRA2O43464 458 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PLRG1O43660 514 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 GCATO75600 419 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 RPP40O75818 363 aaKnown RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 URI1O94763 535 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 PGLSO95336 258 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 MT-CYBP00156 380 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 CPP00450 1065 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 CEACAM5P06731 702 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ADRB3P13945 408 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 CD6P30203 668 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 ACTN2P35609 894 aa6.36□□□□□ -1.39
PRKDC-211ENST00000546304 COILP38432 576 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-211ENST00000546304 MMP12P39900 470 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms