RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SRRM3	A6NNA2	597 aa	Predicted RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	JRK	O75564	520 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	PLA2G2A	P14555	144 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	GARS	P41250	739 aa	Known RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	PDLIM4	P50479	330 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	CLNS1A	P54105	237 aa	Known RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	CDH8	P55286	799 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	HNRNPH2	P55795	449 aa	Known RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	SEC61B	P60468	96 aa	Known RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ZBED6	P86452	979 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ZXDB	P98169	803 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	DDR1	Q08345	913 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	CTF1	Q16619	201 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	MEA1	Q16626	185 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ASTE1	Q2TB18	679 aa	Predicted RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	JADE1	Q6IE81	842 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	SLC36A4	Q6YBV0	504 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ZNF114	Q8NC26	417 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	OR2AK2	Q8NG84	335 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	HIPK2	Q9H2X6	1198 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	GHITM	Q9H3K2	345 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	SYNC	Q9H7C4	482 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	C1RL	Q9NZP8	487 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	CWC15	Q9P013	229 aa	Known RBP	4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	NFS1	Q9Y697	457 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	SESN1	Q9Y6P5	492 aa		4.23	□□□□□ -1.73
RAP1B-231	ENST00000544639	IGLV5-37	A0A075B6J1	123 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639		A6NCN8	305 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	AGAP14	A8MT82	685 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PRSS47	A8MTI9	375 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	BTBD18	B2RXH4	712 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PTGES3L	E9PB15	166 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	IKBKB	O14920	756 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	VILL	O15195	856 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	DAB1	O75553	588 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	RFPL2	O75678	378 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	DDN	O94850	711 aa	Predicted RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	EGF	P01133	1207 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	T-ENOL	P0DO92	83 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SRC	P12931	536 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	UBA1	P22314	1058 aa	Known RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	MCM3	P25205	808 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	HOXD13	P35453	343 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PSMB10	P40306	273 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PIK3CA	P42336	1068 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	GALC	P54803	685 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	DSCR9	P59020	149 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CSNK2A1	P68400	391 aa	Predicted RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	MRPS34	P82930	218 aa	Known RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	TFAP4	Q01664	338 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	KIF5A	Q12840	1032 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	MYBPH	Q13203	477 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	NAB2	Q15742	525 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CALCRL	Q16602	461 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PCGF3	Q3KNV8	242 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	LRIF1	Q5T3J3	769 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SPATA1	Q5VX52	437 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	FRG2	Q64ET8	278 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	ZNF280D	Q6N043	979 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	WDR73	Q6P4I2	378 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CHST9	Q7L1S5	443 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	FASTKD5	Q7L8L6	764 aa	Known RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PCGF5	Q86SE9	256 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	TICAM1	Q8IUC6	712 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CSNK2A3	Q8NEV1	391 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	MTBP	Q96DY7	904 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	ELMOD3	Q96FG2	381 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SCMH1	Q96GD3	660 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	GRAMD2B	Q96HH9	432 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	MED30	Q96HR3	178 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	PGAM5	Q96HS1	289 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	THOC3	Q96J01	351 aa	Known RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	OR1F2P	Q96R84	312 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CSF3R	Q99062	836 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SDF4	Q9BRK5	362 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SEBOX	Q9HB31	216 aa	Predicted RBP	4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CD93	Q9NPY3	652 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SETD4	Q9NVD3	440 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SELENON	Q9NZV5	590 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	TBC1D29	Q9UFV1	150 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	ACSL5	Q9ULC5	683 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	SNX9	Q9Y5X1	595 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	CLIC4	Q9Y696	253 aa		4.22	□□□□□ -1.73
RAP1B-231	ENST00000544639	GOLGA6L9	A6NEM1	432 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	CDRT15L2	A8MXV6	281 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	ATP2A1	O14983	1001 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	GABRB1	P18505	474 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	RRM1	P23921	792 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	TNFRSF8	P28908	595 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	BDKRB2	P30411	391 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	FASLG	P48023	281 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	CLCNKA	P51800	687 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	BRWD1-AS2	P59051	145 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	TAS2R40	P59535	323 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	TUBA1B	P68363	451 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	CREB5	Q02930	508 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms