RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 KIAA1522Q9P206 1035 aaPredicted RBP17.02■□□□□ 0.32
PTPRO-209ENST00000543886 FAM50BQ9Y247 325 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 ZNF711Q9Y462 761 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
PTPRO-209ENST00000543886 H0Y3Z8 333 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 LEFTY2O00292 366 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CCL16O15467 120 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 GLUD1P00367 558 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 JUNP05412 331 aaKnown RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 SP100P23497 879 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PPARGP37231 505 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 SLC25A3Q00325 362 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 SULT2A1Q06520 285 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 RAD51Q06609 339 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 ZRSR2Q15696 482 aaKnown RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 KHDC1Q4VXA5 237 aaKnown RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CUZD1Q86UP6 607 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 KIRREL3Q8IZU9 778 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 WDR60Q8WVS4 1066 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 GPR63Q9BZJ6 419 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 EBF2Q9HAK2 575 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 FIS1Q9Y3D6 152 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 SLC22A2O15244 555 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 FZD6O60353 706 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 KRT34O76011 436 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PGLSO95336 258 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 FGBP02675 491 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CYBBP04839 570 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PYGLP06737 847 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PFKLP17858 780 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 MAPK8P45983 427 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 KCNC1P48547 511 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CDKN1CP49918 316 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 HERVK_113P63132 956 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 GALNT1Q10472 559 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 LMAN2Q12907 356 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CUL3Q13618 768 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PTPRRQ15256 657 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PTPRNQ16849 979 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 ACSBG2Q5FVE4 666 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 PSAPL1Q6NUJ1 521 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 NET1Q7Z628 596 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 OR6K2Q8NGY2 324 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 RHEBL1Q8TAI7 183 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CLP1Q92989 425 aaKnown RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 CLPTM1LQ96KA5 538 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 ERVK-6Q9BXR3 956 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 TFB2MQ9H5Q4 396 aaKnown RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 MAGEE1Q9HCI5 957 aa17.01■□□□□ 0.31
PTPRO-209ENST00000543886 G3BP2Q9UN86 482 aaKnown RBP17.01■□□□□ 0.31
PTPRO-209ENST00000543886 H7C0S8 307 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 VPS26AO75436 327 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 SUPT7LO94864 414 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 CTPS1P17812 591 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 BCL2L1Q07817 233 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 OR4D1Q15615 310 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 PPM1LQ5SGD2 360 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 ZNF678Q5SXM1 525 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 PAQR3Q6TCH7 311 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 RPS27LQ71UM5 84 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 METTL3Q86U44 580 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 CAMK1DQ8IU85 385 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 PIANPQ8IYJ0 282 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 FIBINQ8TAL6 211 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 CATSPER2Q96P56 530 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 SLC46A2Q9BY10 475 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 DERL2Q9GZP9 239 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 SMG9Q9H0W8 520 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 GSTO2Q9H4Y5 243 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 EVLQ9UI08 416 aaPredicted RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 ARHGAP26Q9UNA1 814 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 GBF1Q92538 1859 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 SMAD6O43541 496 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 SKAP2O75563 359 aaPredicted RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 THRAP10827 490 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 PKMP14618 531 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 PIK3R1P27986 724 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 SATB1Q01826 763 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 PPIGQ13427 754 aaKnown RBP eCLIP17■□□□□ 0.31
PTPRO-209ENST00000543886 PEX6Q13608 980 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 TRMT5Q32P41 509 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 TAS2R42Q7RTR8 314 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 CPSF7Q8N684 471 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 PTGR2Q8N8N7 351 aaPredicted RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 SLC22A17Q8WUG5 538 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 RSRC1Q96IZ7 334 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 GPR21Q99679 349 aa17■□□□□ 0.31
PTPRO-209ENST00000543886 OAS3Q9Y6K5 1087 aaKnown RBP17■□□□□ 0.31
PTPRO-209ENST00000543886 LCHNA4D1U4 455 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 H3BMM5 538 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 UBXN8O00124 270 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 SDHDO14521 159 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 IGSF6O95976 241 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 ADSLP30566 484 aaPredicted RBP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 CD70P32970 193 aa16.99■□□□□ 0.31
PTPRO-209ENST00000543886 RPL26P61254 145 aaKnown RBP16.99■□□□□ 0.31
PTPRO-209ENST00000543886 ATP6V0D1P61421 351 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms