RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 DDA1Q9BW61 102 aa22.54■■□□□ 1.2
CDKN3-207ENST00000543789 ASPSCR1Q9BZE9 553 aa22.54■■□□□ 1.2
CDKN3-207ENST00000543789 SLC39A1Q9NY26 324 aa22.54■■□□□ 1.2
CDKN3-207ENST00000543789 KCNK4Q9NYG8 393 aa22.54■■□□□ 1.2
CDKN3-207ENST00000543789 CNOT8Q9UFF9 292 aaKnown RBP22.54■■□□□ 1.2
CDKN3-207ENST00000543789 PLEKHM1Q9Y4G2 1056 aa22.54■■□□□ 1.2
CDKN3-207ENST00000543789 MAFKO60675 156 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 THRAP10827 490 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 GZMAP12544 262 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 ARL4AP40617 200 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 MAXP61244 160 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 PTPRRQ15256 657 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 TMEM71Q6P5X7 295 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 TMCO3Q6UWJ1 677 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 MCCC1Q96RQ3 725 aaPredicted RBP22.53■■□□□ 1.2
CDKN3-207ENST00000543789 ETNK2Q9NVF9 386 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 TMEM98Q9Y2Y6 226 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 PPIL1Q9Y3C6 166 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 HECTD1Q9ULT8 2610 aa22.53■■□□□ 1.2
CDKN3-207ENST00000543789 SCN8AQ9UQD0 1980 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 LIFP15018 202 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 CTPS1P17812 591 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 CSF2RBP32927 897 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 PCK1P35558 622 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 GPLD1P80108 840 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 DPYSL2Q16555 572 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 BOLA3Q53S33 107 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 DCAF12Q5T6F0 453 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 MARC1Q5VT66 337 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 ADAMTSL4Q6UY14 1074 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 POLNQ7Z5Q5 900 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 CACNA2D3Q8IZS8 1091 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 NDUFAF2Q8N183 169 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 OR2M4Q96R27 311 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 HAUS4Q9H6D7 363 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 OCIAD1Q9NX40 245 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 MAST4O15021 2626 aa22.52■■□□□ 1.2
CDKN3-207ENST00000543789 B4E171 279 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 IL1R2P27930 398 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 TSPAN7P41732 249 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 MMP13P45452 471 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 RFLNAQ6ZTI6 216 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 FAM129CQ86XR2 697 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 ATPAF2Q8N5M1 289 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 PIH1D2Q8WWB5 315 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 AP2M1Q96CW1 435 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 AHCYL2Q96HN2 611 aaKnown RBP22.51■■□□□ 1.19
CDKN3-207ENST00000543789 SLC38A3Q99624 504 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 ABCG8Q9H221 673 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 HSD3B7Q9H2F3 369 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 TMEM9Q9P0T7 183 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 CD84Q9UIB8 345 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 SCINQ9Y6U3 715 aa22.51■■□□□ 1.19
CDKN3-207ENST00000543789 TRBV23OR9-2A0A075B6M9 112 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 A0A0U1RQS6 177 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 EFCAB7A8K855 629 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 RAD1O60671 282 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 SOD1P00441 154 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 PPM1FP49593 454 aaPredicted RBP22.5■■□□□ 1.19
CDKN3-207ENST00000543789 CDH6P55285 790 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 RAB15P59190 212 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 TLE1Q04724 770 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 NCAPHQ15003 741 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 ASIC2Q16515 512 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 STX1AQ16623 288 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 SMTNL2Q2TAL5 461 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 PYCR3Q53H96 274 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 COLEC12Q5KU26 742 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 MARK2Q7KZI7 788 aaKnown RBP22.5■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF571Q7Z3V5 609 aaPredicted RBP22.5■■□□□ 1.19
CDKN3-207ENST00000543789 NLRP8Q86W28 1048 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 HSPH1Q92598 858 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF653Q96CK0 615 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 CSPG4P5Q96PW8 444 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 ZMYND15Q9H091 742 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 MRPL47Q9HD33 250 aaKnown RBP22.5■■□□□ 1.19
CDKN3-207ENST00000543789 PDP2Q9P2J9 529 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 MYO1AQ9UBC5 1043 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 BSNQ9UPA5 3926 aa22.5■■□□□ 1.19
CDKN3-207ENST00000543789 ANKRD36A6QL64 1941 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 LRRC53A6NM62 1247 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 PYGLP06737 847 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 CCR10P46092 362 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 FASLGP48023 281 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 POLE2P56282 527 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 PTSQ03393 145 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 KCNAB2Q13303 367 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 LRRC66Q68CR7 880 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 CLEC17AQ6ZS10 378 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 PTRH1Q86Y79 214 aaKnown RBP22.49■■□□□ 1.19
CDKN3-207ENST00000543789 GALNT13Q8IUC8 556 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 NRSN1Q8IZ57 195 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 OR10G6Q8NH81 332 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF564Q8TBZ8 553 aaPredicted RBP22.49■■□□□ 1.19
CDKN3-207ENST00000543789 SCAMP4Q969E2 229 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 CATSPER2Q96P56 530 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.49■■□□□ 1.19
CDKN3-207ENST00000543789 TUBD1Q9UJT1 453 aa22.49■■□□□ 1.19
CDKN3-207ENST00000543789 TLN1Q9Y490 2541 aaKnown RBP22.49■■□□□ 1.19
CDKN3-207ENST00000543789 ZNF891A8MT65 544 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms