RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 C19orf60Q96EN9 201 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 MRPS26Q9BYN8 205 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 FBXO44Q9H4M3 255 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 REEP1Q9H902 201 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 ATXN10Q9UBB4 475 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 LEF1Q9UJU2 399 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CDH9Q9ULB4 789 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 PCDHGC3Q9UN70 934 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CAB39Q9Y376 341 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 NPEPPSL1A6NEC2 478 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 KPNA4O00629 521 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 NBNO60934 754 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 PFKPQ01813 784 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 TARBP2Q15633 366 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 NADK2Q4G0N4 442 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 DOK6Q6PKX4 331 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 UBR7Q8N806 425 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 ARL10Q8N8L6 244 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CD101Q93033 1021 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 FEM1CQ96JP0 617 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CXorf21Q9HAI6 301 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 KPNA3O00505 521 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 STK25O00506 426 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 MSH3P20585 1137 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 RRM2P31350 389 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 SOX6P35712 828 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 FBXW4P57775 412 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 HIST2H2ACQ16777 129 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CEP78Q5JTW2 689 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 BROXQ5VW32 411 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 HIST2H2AA3Q6FI13 130 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 FAM45BPQ6NSW5 357 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 STRADAQ7RTN6 431 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 C2orf73Q8N5S3 287 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 OR52E6Q96RD3 313 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 PEBP4Q96S96 227 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 FBRSL1Q9HCM7 1045 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 HMG20AQ9NP66 347 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 MRPS7Q9Y2R9 242 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 TPRKBQ9Y3C4 175 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 SAMHD1Q9Y3Z3 626 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 PQBP1O60828 265 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 TNFRSF21O75509 655 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 SLC22A3O75751 556 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 AP2A1O95782 977 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 TBX18O95935 607 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 SPATA31D3P0C874 917 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 GRK4P32298 578 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 CENPAP49450 140 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 LILRA4P59901 499 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 NAB1Q13506 487 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 ITGA7Q13683 1181 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 COL9A2Q14055 689 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 PRMT9Q6P2P2 845 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 SPATA31D4Q6ZUB0 917 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 PLD6Q8N2A8 252 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 GALNT15Q8N3T1 639 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 DQX1Q8TE96 717 aaKnown RBP12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 GPR21Q99679 349 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 EHD3Q9NZN3 535 aa12.92□□□□□ -0.34
TUBGCP2-210ENST00000543663 KPNA5O15131 536 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 STBD1O95210 358 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 MED26O95402 600 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 TPSB2P20231 275 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 GRM5P41594 1212 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 TPSAB1Q15661 275 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 ALFQ53S48 1182 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 TTC23Q5W5X9 447 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 RETSATQ6NUM9 610 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 GALNT18Q6P9A2 607 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 PAGE2Q7Z2X7 111 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 ZC3H7AQ8IWR0 971 aaKnown RBP12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 ADCY4Q8NFM4 1077 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 OR4L1Q8NH43 312 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 FBXO27Q8NI29 283 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 PCED1BQ96HM7 432 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 SPATA16Q9BXB7 569 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 TOR4AQ9NXH8 423 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 ADGRE2Q9UHX3 823 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 GTF2A1LQ9UNN4 478 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 J3QRK9 145 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 NOBOXO60393 691 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 WBP4O75554 376 aaKnown RBP12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 KCNH1O95259 989 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 L1CAMP32004 1257 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 HPCAP84074 193 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 BCL2L1Q07817 233 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 INAQ16352 499 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
TUBGCP2-210ENST00000543663 RNF180Q86T96 592 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms