RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CD247P20963 164 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 HOXC13P31276 330 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 RFC2P35250 354 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 SLC26A3P40879 764 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 CD86P42081 329 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 YAP1P46937 504 aaKnown RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 ARSDP51689 593 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 APLP1P51693 650 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 NEDD8Q15843 81 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 PFKFB4Q16877 469 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 XKR5Q6UX68 686 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 TERB1Q8NA31 727 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 TBC1D15Q8TC07 691 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 NSUN5Q96P11 429 aaKnown RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 C8orf4Q9NR00 106 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 SLC7A4O43246 635 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 TREHO43280 583 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 SUPT3HO75486 399 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 MATN4O95460 622 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 RPS9P46781 194 aaKnown RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 GSK3BP49841 420 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 C21orf59P57076 290 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 NFYCQ13952 458 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 PLCL1Q15111 1095 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 FUT11Q495W5 492 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 CYBRD1Q53TN4 286 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 RABL3Q5HYI8 236 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 BRMS1LQ5PSV4 323 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 TMEM125Q96AQ2 219 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 KCTD14Q9BQ13 255 aaPredicted RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 SEZ6LQ9BYH1 1024 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 ALG2Q9H553 416 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 CSNK1G1Q9HCP0 422 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
DDX11-223ENST00000542838 POLG2Q9UHN1 485 aa12.9□□□□□ -0.34
DDX11-223ENST00000542838 TNPO2O14787 897 aaKnown RBP12.9□□□□□ -0.35
DDX11-223ENST00000542838 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.35
DDX11-223ENST00000542838 SNAP29O95721 258 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 IGLV3-25P01717 112 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 MT-ND1P03886 318 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 CCR1P32246 355 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 MANEALQ5VSG8 457 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 KANK2Q63ZY3 851 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 BLOC1S3Q6QNY0 202 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 GALNT7Q86SF2 657 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 ZNF354CQ86Y25 554 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 COLGALT2Q8IYK4 626 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.35
DDX11-223ENST00000542838 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 VPS50Q96JG6 964 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 SDR39U1Q9NRG7 319 aaPredicted RBP12.9□□□□□ -0.35
DDX11-223ENST00000542838 ANAPC2Q9UJX6 822 aa12.9□□□□□ -0.35
DDX11-223ENST00000542838 DICER1Q9UPY3 1922 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 H3BMM5 538 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 PAPSS2O95340 614 aaPredicted RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 PCSK1P29120 753 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 PSMD7P51665 324 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 AFF1P51825 1210 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 FOXM1Q08050 763 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 BNIP3Q12983 259 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 CBX3Q13185 183 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 VPS33AQ96AX1 596 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 COX4I2Q96KJ9 171 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 TRIM54Q9BYV2 358 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 KCTD3Q9Y597 815 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 V9GYQ6 96 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 E9PAM4 449 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 CLASP2O75122 1294 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 CD97P48960 835 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 MAPK10P53779 464 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 DIO3P55073 304 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 LIPEQ05469 1076 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 OR4D1Q15615 310 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 C14orf80Q86SX3 495 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 RTL3Q8N8U3 475 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 ZBTB8BQ8NAP8 495 aaPredicted RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 DDHD1Q8NEL9 900 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 IMP4Q96G21 291 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 PLEKHA8Q96JA3 519 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 KLHL5Q96PQ7 755 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 GAD1Q99259 594 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 SEPHS2Q99611 448 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 INTS10Q9NVR2 710 aaKnown RBP12.89□□□□□ -0.35
DDX11-223ENST00000542838 NUDT5Q9UKK9 219 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 ANKRD12Q6UB98 2062 aa12.89□□□□□ -0.35
DDX11-223ENST00000542838 BAIAP3O94812 1187 aa12.88□□□□□ -0.35
DDX11-223ENST00000542838 LDLRP01130 860 aa12.88□□□□□ -0.35
DDX11-223ENST00000542838 IDO1P14902 403 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms