RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RSPH9Q9H1X1 276 aaPredicted RBP3.31□□□□□ -1.88
USP28-210ENST00000542033 SMARCAD1Q9H4L7 1026 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 CLK4Q9HAZ1 481 aaKnown RBP3.31□□□□□ -1.88
USP28-210ENST00000542033 BPIFA1Q9NP55 256 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 OR6C3Q9NZP0 311 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 MORF4L1Q9UBU8 362 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 CHORDC1Q9UHD1 332 aaPredicted RBP3.31□□□□□ -1.88
USP28-210ENST00000542033 SLCO3A1Q9UIG8 710 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 ODF2LQ9ULJ1 636 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 CORO1CQ9ULV4 474 aaPredicted RBP3.31□□□□□ -1.88
USP28-210ENST00000542033 PCDHGB4Q9UN71 923 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 KCNE2Q9Y6J6 123 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 A3GALT2U3KPV4 340 aa3.31□□□□□ -1.88
USP28-210ENST00000542033 SMARCA2P51531 1590 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 WRNQ14191 1432 aaPredicted RBP eCLIP3.3□□□□□ -1.88
USP28-210ENST00000542033 KANK1Q14678 1352 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 A0A0U1RQF3 1178 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 LRRC53A6NM62 1247 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TMCO5BA8MYB1 307 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TGFB1I1O43294 461 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 KCNJ13O60928 360 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 BEST1O76090 585 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 NDUFB4O95168 129 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 VNN2O95498 520 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 MT-CYBP00156 380 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 TFP02787 698 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 EIF2S1P05198 315 aaKnown RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 ADRB2P07550 413 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 NGFRP08138 427 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ACAA1P09110 424 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 CCDC175P0C221 793 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TGFB3P10600 412 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ETFAP13804 333 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 CD58P19256 250 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 EDN2P20800 178 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 GABRB2P47870 512 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 CXCR3P49682 368 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 GNAQP50148 359 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 NANOS2P60321 138 aaKnown RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 OLR1P78380 273 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 PRAMEP78395 509 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ROR1Q01973 937 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TMEM115Q12893 351 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 CDC16Q13042 620 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 NEDD9Q14511 834 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 PLCB4Q15147 1175 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 SHBQ15464 509 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TAF7Q15545 349 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 TCTN1Q2MV58 587 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 EFHC1Q5JVL4 640 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 NAA16Q6N069 864 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 C8orf82Q6P1X6 216 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 SARM1Q6SZW1 724 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 SASS6Q6UVJ0 657 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 SLC46A3Q7Z3Q1 461 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TDRPQ86YL5 185 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 IQCF2Q8IXL9 164 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ADGRF2Q8IZF7 708 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 WDTC1Q8N5D0 677 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ELP5Q8TE02 316 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 C17orf50Q8WW18 174 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ARHGEF2Q92974 986 aaKnown RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 FBXL8Q96CD0 374 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 PHF21BQ96EK2 531 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ZNF479Q96JC4 524 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 RADILQ96JH8 1075 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 ZNF396Q96N95 335 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 MAK16Q9BXY0 300 aaKnown RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 FTOQ9C0B1 505 aaKnown RBP eCLIP3.3□□□□□ -1.88
USP28-210ENST00000542033 KAT14Q9H8E8 782 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 TRPV5Q9NQA5 729 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 PCDHB16Q9NRJ7 776 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 WWOXQ9NZC7 414 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 OGFRQ9NZT2 677 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 SELENONQ9NZV5 590 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 GIMAP2Q9UG22 337 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 A4GNTQ9UNA3 340 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 MAGED1Q9Y5V3 778 aaPredicted RBP3.3□□□□□ -1.88
USP28-210ENST00000542033 PRDM2Q13029 1718 aa3.3□□□□□ -1.88
USP28-210ENST00000542033 IBTKQ9P2D0 1353 aaPredicted RBP3.29□□□□□ -1.88
USP28-210ENST00000542033 UQCRHLA0A096LP55 91 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 LINC01553A4QN01 128 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 H7C0S8 307 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 TIMM23O14925 209 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 GJB3O75712 270 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 TPPPO94811 219 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 CSPG5O95196 566 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 PGM3O95394 542 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 CH25HO95992 272 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 APOA4P06727 396 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 UQCRHP07919 91 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 CCDC159P0C7I6 412 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 SKILP12757 684 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 GPTP24298 496 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 MSNP26038 577 aaKnown RBP3.29□□□□□ -1.88
USP28-210ENST00000542033 CHATP28329 748 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 CCKBRP32239 447 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 ICAM3P32942 547 aa3.29□□□□□ -1.88
USP28-210ENST00000542033 ACSL1P33121 698 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms