RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ZNF470Q6ECI4 717 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 MAMSTRQ6ZN01 415 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ZSWIM9Q86XI8 627 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ANKRD42Q8N9B4 389 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 BANPQ8N9N5 519 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 OR6P1Q8NGX9 317 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ALKBH8Q96BT7 664 aaKnown RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 SUV39H2Q9H5I1 410 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 MAGEE1Q9HCI5 957 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 NLE1Q9NVX2 485 aaPredicted RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 MID1O15344 667 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 APBB3O95704 486 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 SLC4A1P02730 911 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ALPIP09923 528 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ACADMP11310 421 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 METAP1P53582 386 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 GNGT1P63211 74 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 SLC18A2Q05940 514 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 GABPB1Q06547 395 aaPredicted RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 DNAJC3Q13217 504 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 GRM3Q14832 879 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 CST6Q15828 149 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 CNPY4Q8N129 248 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 TTC30BQ8N4P2 665 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 C2CD4AQ8NCU7 369 aaPredicted RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 OR4K2Q8NGD2 314 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 CALML6Q8TD86 181 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ECHDC3Q96DC8 303 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 ATXN7L3BQ96GX2 97 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 SUDS3Q9H7L9 328 aaPredicted RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 FBRSQ9HAH7 460 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 INTS9Q9NV88 658 aaKnown RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 A0A0J9YYE9 177 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 SHOX2O60902 331 aaPredicted RBP27.74■■■□□ 2.03
CCM2-218ENST00000541586 TRBC1P01850 177 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 DNTTP04053 509 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 LPOP22079 712 aaPredicted RBP27.74■■■□□ 2.03
CCM2-218ENST00000541586 GABRB3P28472 473 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 ABCG1P45844 678 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 MPP1Q00013 466 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 CSTF1Q05048 431 aaKnown RBP27.74■■■□□ 2.03
CCM2-218ENST00000541586 PTAR1Q7Z6K3 402 aaPredicted RBP27.74■■■□□ 2.03
CCM2-218ENST00000541586 CAMKK1Q8N5S9 505 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 TMIEQ8NEW7 156 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 MGARPQ8TDB4 240 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 GANCQ8TET4 914 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 ZNF641Q96N77 438 aaPredicted RBP27.74■■■□□ 2.03
CCM2-218ENST00000541586 KLHL32Q96NJ5 620 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 TPSD1Q9BZJ3 242 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 ZNF711Q9Y462 761 aa27.74■■■□□ 2.03
CCM2-218ENST00000541586 A0A0U1RQS6 177 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 OR51F1A6NGY5 319 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 C1QTNF3-AMACRE9PGA6 284 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 K7ESF4 209 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 AHSGP02765 367 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 PSMA3P25788 255 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 TERF2Q15554 542 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 FAM46CQ5VWP2 391 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 GDPD4Q6W3E5 623 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 PSD3Q9NYI0 1048 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 NKIRAS1Q9NYS0 192 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 FBXO5Q9UKT4 447 aa27.73■■■□□ 2.03
CCM2-218ENST00000541586 CCDC162PA2VCL2 907 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 A6NNZ2 444 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 PLK4O00444 970 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 ALDOAP04075 364 aaKnown RBP27.72■■■□□ 2.03
CCM2-218ENST00000541586 RPA3P35244 121 aaPredicted RBP27.72■■■□□ 2.03
CCM2-218ENST00000541586 SLC18A1P54219 525 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 PDE1BQ01064 536 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 UGP2Q16851 508 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 TUBB8Q3ZCM7 444 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 ZC3HC1Q86WB0 502 aaKnown RBP27.72■■■□□ 2.03
CCM2-218ENST00000541586 GABPB2Q8TAK5 448 aaPredicted RBP27.72■■■□□ 2.03
CCM2-218ENST00000541586 CDKN2AIPNLQ96HQ2 116 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 VPS39Q96JC1 886 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 MTO1Q9Y2Z2 717 aaKnown RBP27.72■■■□□ 2.03
CCM2-218ENST00000541586 GOT2P00505 430 aaKnown RBP27.72■■■□□ 2.03
CCM2-218ENST00000541586 CCNFP41002 786 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 KIAA0408Q6ZU52 694 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 DCLK2Q8N568 766 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 CENPTQ96BT3 561 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 LRIG1Q96JA1 1093 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 RHOJQ9H4E5 214 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 MLXIPLQ9NP71 852 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 DYRK4Q9NR20 520 aa27.72■■■□□ 2.03
CCM2-218ENST00000541586 TPP1O14773 563 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 ADH1BP00325 375 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 HNF1BP35680 557 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 DMWDQ09019 674 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 LRRC14Q15048 493 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 LYSMD3Q7Z3D4 306 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 CILP2Q8IUL8 1156 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 OTUD6BQ8N6M0 293 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 DENND1AQ8TEH3 1009 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 APOPT1Q96IL0 206 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 OMDQ99983 421 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 GPR63Q9BZJ6 419 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 CD93Q9NPY3 652 aa27.71■■■□□ 2.03
CCM2-218ENST00000541586 MARCH4Q9P2E8 410 aaPredicted RBP27.71■■■□□ 2.03
CCM2-218ENST00000541586 PHTF1Q9UMS5 762 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms