RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 SNX9Q9Y5X1 595 aa4.34□□□□□ -1.71
RAP1B-224ENST00000541216 A0A1B0GUV1 79 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 LIPT2A6NK58 231 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 BTBD18B2RXH4 712 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 VCYO14598 125 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 BAIAP3O94812 1187 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 PMS2P2O95744 297 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 DDX58O95786 925 aaKnown RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 MLYCDO95822 493 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 ZNF182P17025 639 aaPredicted RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SEC61BP60468 96 aaKnown RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SF3B4Q15427 424 aaKnown RBP eCLIP4.33□□□□□ -1.726e-10■■□□□ 11.5
RAP1B-224ENST00000541216 MED22Q15528 200 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 CALCRLQ16602 461 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SOWAHCQ53LP3 525 aaPredicted RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 WDR73Q6P4I2 378 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 NCEH1Q6PIU2 408 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SLC36A4Q6YBV0 504 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 DPPA4Q7L190 304 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 FOXP4Q8IVH2 680 aaPredicted RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 ARHGAP12Q8IWW6 846 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 DSELQ8IZU8 1212 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 NGEFQ8N5V2 710 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 PPHLN1Q8NEY8 458 aaKnown RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SMARCE1Q969G3 411 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SKA1Q96BD8 255 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 RHBDF1Q96CC6 855 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 RTP4Q96DX8 246 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 GRAMD2BQ96HH9 432 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 SLCO5A1Q9H2Y9 848 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 C6orf106Q9H6K1 298 aaPredicted RBP4.33□□□□□ -1.72
RAP1B-224ENST00000541216 PCDH9Q9HC56 1237 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 ZNF224Q9NZL3 707 aa4.33□□□□□ -1.72
RAP1B-224ENST00000541216 ZNF587BE7ETH6 402 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 ACOT8O14734 319 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 MID1O15344 667 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 CCNDBP1O95273 360 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 EIF2S1P05198 315 aaKnown RBP4.32□□□□□ -1.72
RAP1B-224ENST00000541216 DAOP14920 347 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 CLCN3P51790 818 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 NIPAL4Q0D2K0 466 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 ILF3Q12906 894 aaKnown RBP eCLIP4.32□□□□□ -1.72
RAP1B-224ENST00000541216 KIF19Q2TAC6 998 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 ZNF280DQ6N043 979 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 GSTA5Q7RTV2 222 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 SATL1Q86VE3 508 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 BEST3Q8N1M1 668 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 FRMD1Q8N878 549 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 OR14L1PQ8NHC6 308 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 TANKQ92844 425 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 ARHGEF26Q96DR7 871 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 RRNAD1Q96FB5 475 aaKnown RBP4.32□□□□□ -1.72
RAP1B-224ENST00000541216 C3orf30Q96M34 536 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 TMEM68Q96MH6 324 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 KXD1Q9BQD3 176 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 SEBOXQ9HB31 216 aaPredicted RBP4.32□□□□□ -1.72
RAP1B-224ENST00000541216 RANGRFQ9HD47 186 aaPredicted RBP4.32□□□□□ -1.72
RAP1B-224ENST00000541216 DIAPH3Q9NSV4 1193 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 SMARCAL1Q9NZC9 954 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 SIX4Q9UIU6 781 aa4.32□□□□□ -1.72
RAP1B-224ENST00000541216 PI4KAP2A4QPH2 592 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 MAGEA13PA6NCF6 341 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 HCRTR2O43614 444 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 SH3BP5O60239 455 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 RNASEH2AO75792 299 aaKnown RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 IPO7O95373 1038 aaKnown RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 TM4SF1P30408 202 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 PEX5P50542 639 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 SETQ01105 290 aaPredicted RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 COASYQ13057 564 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 SNTA1Q13424 505 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 CTF1Q16619 201 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 CCDC30Q5VVM6 783 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 SIGIRRQ6IA17 410 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 CAPRIN2Q6IMN6 1127 aaKnown RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 NRROSQ86YC3 692 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 ARHGEF2Q92974 986 aaKnown RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 BICD1Q96G01 975 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 ADGRG7Q96K78 797 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 ZNF385AQ96PM9 386 aaKnown RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 ACSS1Q9NUB1 689 aaPredicted RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 MCM9Q9NXL9 1143 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 ACSL5Q9ULC5 683 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 TTC7AQ9ULT0 858 aaPredicted RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 PCDHGB1Q9Y5G3 927 aa4.31□□□□□ -1.72
RAP1B-224ENST00000541216 BAZ1AQ9NRL2 1556 aaPredicted RBP4.31□□□□□ -1.72
RAP1B-224ENST00000541216 ITIH6Q6UXX5 1313 aa4.3□□□□□ -1.72
RAP1B-224ENST00000541216 GOLGA6L9A6NEM1 432 aa4.3□□□□□ -1.72
RAP1B-224ENST00000541216 SMTNL1A8MU46 457 aa4.3□□□□□ -1.72
RAP1B-224ENST00000541216 AKR1B15C9JRZ8 316 aaPredicted RBP4.3□□□□□ -1.72
RAP1B-224ENST00000541216 SLC16A5O15375 505 aa4.3□□□□□ -1.72
RAP1B-224ENST00000541216 WDHD1O75717 1129 aaPredicted RBP4.3□□□□□ -1.72
RAP1B-224ENST00000541216 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
RAP1B-224ENST00000541216 BDKRB2P30411 391 aa4.3□□□□□ -1.72
RAP1B-224ENST00000541216 HOXC9P31274 260 aa4.3□□□□□ -1.72
RAP1B-224ENST00000541216 CLCNKAP51800 687 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms