RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 SLCO6A1Q86UG4 719 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 NRSN1Q8IZ57 195 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 OR4C6Q8NH72 309 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ATL2Q8NHH9 583 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SLC35B2Q8TB61 432 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 C1orf54Q8WWF1 131 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 OR1E3Q8WZA6 343 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 EID2BQ96D98 161 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 PDXPQ96GD0 296 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 PDLIM2Q96JY6 352 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 AGAP2Q99490 1192 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 GORASP1Q9BQQ3 440 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 FICDQ9BVA6 458 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 RIOK2Q9BVS4 552 aaKnown RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 TLR10Q9BXR5 811 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 TEX101Q9BY14 249 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 FAM83DQ9H4H8 585 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SUDS3Q9H7L9 328 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 CYP4F12Q9HCS2 524 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 MRPL40Q9NQ50 206 aaKnown RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 PHPT1Q9NRX4 125 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 TOR4AQ9NXH8 423 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 NLGN3Q9NZ94 848 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 PKD2L2Q9NZM6 624 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 MOSPD1Q9UJG1 213 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 AAR2Q9Y312 384 aaKnown RBP9.2□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF711Q9Y462 761 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 SPO11Q9Y5K1 396 aa9.2□□□□□ -0.94
SNHG1-215ENST00000540904 TMEM131Q92545 1883 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ANKRD36A6QL64 1941 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 PRSS38A1L453 326 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TNFRSF10CO14798 259 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 AURKAO14965 403 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 INPP4BO15327 924 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 CEP104O60308 925 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TOP3BO95985 862 aaKnown RBP9.19□□□□□ -0.94
SNHG1-215ENST00000540904 SOD1P00441 154 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TNFP01375 233 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 FGGP02679 453 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ANXA6P08133 673 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 CELA2BP08218 269 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-215ENST00000540904 GIMD1P0DJR0 217 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 CKMT2P17540 419 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 HLA-DPA1P20036 260 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 SPINK2P20155 84 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 PMLP29590 882 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 OLIG2Q13516 323 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 SNX1Q13596 522 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF569Q5MCW4 686 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ALS2CLQ60I27 953 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 DOK6Q6PKX4 331 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ADAMTSL4Q6UY14 1074 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF765Q7L2R6 523 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TMC3Q7Z5M5 1100 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TRIM74Q86UV6 250 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 REXO1L1PQ8IX06 675 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 CHCHD4Q8N4Q1 142 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TAB3Q8N5C8 712 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-215ENST00000540904 BLOC1S5Q8TDH9 187 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 HIC2Q96JB3 615 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 TBATAQ96M53 351 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 WDR24Q96S15 920 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 SRPK1Q96SB4 655 aaKnown RBP9.19□□□□□ -0.94
SNHG1-215ENST00000540904 APOL2Q9BQE5 337 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 DUSP23Q9BVJ7 150 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 FRMD8P1Q9BZ68 369 aaPredicted RBP9.19□□□□□ -0.94
SNHG1-215ENST00000540904 CLPBQ9H078 707 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF148Q9UQR1 794 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 CSNK1G3Q9Y6M4 447 aa9.19□□□□□ -0.94
SNHG1-215ENST00000540904 RGSL1A5PLK6 1076 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 FADS2P1A8MWK0 482 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 LMO7DNF2Z398 122 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 YY2O15391 372 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 HYAL3O43820 417 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 KIF5CO60282 957 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 USP12O75317 370 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 TRIM16O95361 564 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 IFNB1P01574 187 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 FGF1P05230 155 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 PYGLP06737 847 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 MYF5P13349 255 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 BPIP17213 487 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 TEAD1P28347 426 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 STIP1P31948 543 aaKnown RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 GNPDA1P46926 289 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 POLD2P49005 469 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 ACADVLP49748 655 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 DAB2P98082 770 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 SPARCL1Q14515 664 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 ELOCQ15369 112 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 OASLQ15646 514 aaKnown RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 LONRF2Q1L5Z9 754 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 PARP6Q2NL67 630 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 HENMT1Q5T8I9 393 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms