RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 APOHP02749 345 aaPredicted RBP3.54□□□□□ -1.84
MDM2-227ENST00000540709 CDKN1AP38936 164 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 MAPK9P45984 424 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 CTCFP49711 727 aaPredicted RBP3.54□□□□□ -1.84
MDM2-227ENST00000540709 TRPC3Q13507 836 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 GTF2H2Q13888 395 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 KRT24Q2M2I5 525 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 SIGIRRQ6IA17 410 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 TTI2Q6NXR4 508 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 GTF2H2CQ6P1K8 395 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 QSOX2Q6ZRP7 698 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 SLC46A3Q7Z3Q1 461 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 NFE4Q86UQ8 179 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 KLHL29Q96CT2 875 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 SH3GL2Q99962 352 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 SYT17Q9BSW7 474 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 FUZQ9BT04 418 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 IFIH1Q9BYX4 1025 aaKnown RBP3.54□□□□□ -1.84
MDM2-227ENST00000540709 GLIS2Q9BZE0 524 aaPredicted RBP3.54□□□□□ -1.84
MDM2-227ENST00000540709 MMP25Q9NPA2 562 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 FAM118AQ9NWS6 357 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 TMEM160Q9NX00 188 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 SLC25A10Q9UBX3 287 aaPredicted RBP3.54□□□□□ -1.84
MDM2-227ENST00000540709 AAR2Q9Y312 384 aaKnown RBP3.54□□□□□ -1.84
MDM2-227ENST00000540709 SCINQ9Y6U3 715 aa3.54□□□□□ -1.84
MDM2-227ENST00000540709 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 LILRA5A6NI73 299 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 LRRC53A6NM62 1247 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 VCYO14598 125 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 WDR1O75083 606 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 FGF5P12034 268 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 HSD3B1P14060 373 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 DDX5P17844 614 aaKnown RBP3.53□□□□□ -1.84
MDM2-227ENST00000540709 GM2AP17900 193 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 RAD23BP54727 409 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 EEF1A1P68104 462 aaKnown RBP3.53□□□□□ -1.84
MDM2-227ENST00000540709 CSNK2A1P68400 391 aaPredicted RBP3.53□□□□□ -1.84
MDM2-227ENST00000540709 PITX1P78337 314 aaPredicted RBP3.53□□□□□ -1.84
MDM2-227ENST00000540709 BIRC3Q13489 604 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 TMEM35AQ53FP2 167 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 SIRPB2Q5JXA9 342 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 EEF1A1P5Q5VTE0 462 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 FAM171BQ6P995 826 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 RAD9BQ6WBX8 426 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 ASB18Q6ZVZ8 466 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 CSNK2A3Q8NEV1 391 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 GCC1Q96CN9 775 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 GRAMD2BQ96HH9 432 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 ZNF354BQ96LW1 612 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 FAM110AQ9BQ89 295 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 EIF2AK1Q9BQI3 630 aaKnown RBP3.53□□□□□ -1.84
MDM2-227ENST00000540709 LRRC1Q9BTT6 524 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 PLEKHA4Q9H4M7 779 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 SLC28A3Q9HAS3 691 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 KLHL1Q9NR64 748 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 RRN3Q9NYV6 651 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 TBX20Q9UMR3 447 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 CAMK2AQ9UQM7 478 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 KLHL20Q9Y2M5 609 aa3.53□□□□□ -1.84
MDM2-227ENST00000540709 WDR81Q562E7 1941 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 ANTXRLA6NF34 631 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 USP17L23D6RBM5 183 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 IFRD1O00458 451 aaPredicted RBP3.52□□□□□ -1.85
MDM2-227ENST00000540709 CAVIN2O95810 425 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 LDLRP01130 860 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 IL7RP16871 459 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 ERVK11-1P61568 191 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 DRAP1Q14919 205 aaPredicted RBP3.52□□□□□ -1.85
MDM2-227ENST00000540709 C14orf177Q52M58 125 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 OR7E24Q6IFN5 339 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 GPR180Q86V85 440 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 PCDH20Q8N6Y1 951 aaKnown RBP3.52□□□□□ -1.85
MDM2-227ENST00000540709 CNBD1Q8NA66 436 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 CADM4Q8NFZ8 388 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 CTCFLQ8NI51 663 aaPredicted RBP3.52□□□□□ -1.85
MDM2-227ENST00000540709 PIGTQ969N2 578 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 SLC41A2Q96JW4 573 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 QRFPRQ96P65 431 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 PCGF1Q9BSM1 259 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 SLC25A18Q9H1K4 315 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 ZNF696Q9H7X3 374 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 FKRPQ9H9S5 495 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 KIF9Q9HAQ2 790 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 SEBOXQ9HB31 216 aaPredicted RBP3.52□□□□□ -1.85
MDM2-227ENST00000540709 SLC6A13Q9NSD5 602 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 PPP1R14DQ9NXH3 145 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 GGA3Q9NZ52 723 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 KCND2Q9NZV8 630 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 MPP6Q9NZW5 540 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 DGKBQ9Y6T7 804 aa3.52□□□□□ -1.85
MDM2-227ENST00000540709 UTYO14607 1347 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 RRN3P2A6NIE6 340 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 PMS2P5A8MQ11 134 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 ZNHIT1O43257 154 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 SPINT2O43291 252 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 FTCDO95954 541 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 KRT10P13645 584 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 POLR2CP19387 275 aaPredicted RBP3.51□□□□□ -1.85
MDM2-227ENST00000540709 TIMP3P35625 211 aa3.51□□□□□ -1.85
MDM2-227ENST00000540709 GABRB2P47870 512 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms