RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KCNE4Q8WWG9 221 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 CCDC74AQ96AQ1 378 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 SH3KBP1Q96B97 665 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 PDXPQ96GD0 296 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 RBM41Q96IZ5 413 aaKnown RBP10.36□□□□□ -0.75
CDCA3-208ENST00000540683 CMKLR1Q99788 373 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 FRMD8Q9BZ67 464 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-208ENST00000540683 B3GNT4Q9C0J1 378 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TCEAL2Q9H3H9 227 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-208ENST00000540683 LRRN3Q9H3W5 708 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 FGF22Q9HCT0 170 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 DTLQ9NZJ0 730 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 SEPT10Q9P0V9 454 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 VPS18Q9P253 973 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 SLC17A4Q9Y2C5 497 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 U3KQA8 63 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 ITPR1Q14643 2758 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 A0A0A6YYK5 440 aaPredicted RBP10.35□□□□□ -0.75
CDCA3-208ENST00000540683 C1orf232A0A0U1RR37 186 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 C2orf72A6NCS6 295 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 TMEM202A6NGA9 273 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 HACD1B0YJ81 288 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 B4DGG1 531 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 ANKRD66B4E2M5 251 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 D6RAR5 112 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 NTN3O00634 580 aaPredicted RBP10.35□□□□□ -0.75
CDCA3-208ENST00000540683 PLD2O14939 933 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 STK10O94804 968 aaKnown RBP10.35□□□□□ -0.75
CDCA3-208ENST00000540683 ZRANB2O95218 330 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDCA3-208ENST00000540683 PRKCGP05129 697 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 CD48P09326 243 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 JMJD7P0C870 316 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 FECHP22830 423 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 CD82P27701 267 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 MAGEA1P43355 309 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 GNPDA1P46926 289 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 STC1P52823 247 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 TAS2R40P59535 323 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 COPS2P61201 443 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 SLC9A4Q6AI14 798 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 GPR155Q7Z3F1 870 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 HSD11B1LQ7Z5J1 315 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 TECPR1Q7Z6L1 1165 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 PIM3Q86V86 326 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 RFX6Q8HWS3 928 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 RCOR2Q8IZ40 523 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 PLA2G15Q8NCC3 412 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 TFB1MQ8WVM0 346 aaKnown RBP10.35□□□□□ -0.75
CDCA3-208ENST00000540683 OR1E3Q8WZA6 343 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 P3H4Q92791 437 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 HAUS1Q96CS2 278 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 SLC46A1Q96NT5 459 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 OR2M4Q96R27 311 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 ZSCAN5AQ9BUG6 496 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 SLC25A51Q9H1U9 297 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 EPB41L1Q9H4G0 881 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 FAM83DQ9H4H8 585 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 TRABDQ9H4I3 376 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 MAGEE1Q9HCI5 957 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 LRIT1Q9P2V4 623 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 CHKBQ9Y259 395 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 PCDHGA7Q9Y5G6 932 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 ENTPD2Q9Y5L3 495 aa10.35□□□□□ -0.75
CDCA3-208ENST00000540683 OR5K4A6NMS3 321 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PPFIA2O75334 1257 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 ASMTLO95671 621 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 CPNE6O95741 557 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 JCHAINP01591 159 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 MPOP05164 745 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 RPLP0P05388 317 aaKnown RBP10.34□□□□□ -0.75
CDCA3-208ENST00000540683 CEACAM5P06731 702 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 CTPS1P17812 591 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 VCLP18206 1134 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 DCDC1P59894 354 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 GPLD1P80108 840 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 RHDQ02161 417 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 DSC2Q02487 901 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PTSQ03393 145 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 GBE1Q04446 702 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TRA2AQ13595 282 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDCA3-208ENST00000540683 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDCA3-208ENST00000540683 MAP9Q49MG5 647 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TFDP3Q5H9I0 405 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 C3orf38Q5JPI3 329 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 C11orf63Q6NUN7 778 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 C19orf48Q6RUI8 117 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 CRTC1Q6UUV9 634 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 RAB11FIP2Q7L804 512 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TMTC1Q8IUR5 882 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PHYKPLQ8IUZ5 450 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 TP53INP2Q8IXH6 220 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 FBXO39Q8N4B4 442 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PQLC3Q8N755 202 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 PLD5Q8N7P1 536 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 LPCAT1Q8NF37 534 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 RAPGEF5Q92565 580 aa10.34□□□□□ -0.75
CDCA3-208ENST00000540683 SCARF2Q96GP6 870 aaPredicted RBP10.34□□□□□ -0.75
CDCA3-208ENST00000540683 ATXN7L3BQ96GX2 97 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms