RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 GLTPD2A6NH11 291 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 ENO4A6NNW6 628 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 E7ENX8 843 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 CYR61O00622 381 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 PAGE4O60829 102 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 DIAPH2O60879 1101 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 BBOX1O75936 387 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 TOMM70O94826 608 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 REC8O95072 547 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 GZMAP12544 262 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 KELP23276 732 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 RABIFP47224 123 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 STX1BP61266 288 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 TAP2Q03519 686 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 RNASELQ05823 741 aaKnown RBP6.13□□□□□ -1.43
MRE11-209ENST00000540013 PPATQ06203 517 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 GOLGA8FQ08AF8 430 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 HFEQ30201 348 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 DPCR1Q3MIW9 517 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 HSP90AB3PQ58FF7 597 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 FNDC7Q5VTL7 733 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 SUSD4Q5VX71 490 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 C15orf52Q6ZUT6 534 aaKnown RBP6.13□□□□□ -1.43
MRE11-209ENST00000540013 COPS6Q7L5N1 327 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 CLNKQ7Z7G1 428 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 CEP57Q86XR8 500 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 ZNF34Q8IZ26 560 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 OR4N4Q8N0Y3 316 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 PSMA8Q8TAA3 256 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 RNF31Q96EP0 1072 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 KLHL32Q96NJ5 620 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 PKP4Q99569 1192 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 SH3GL2Q99962 352 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 MGME1Q9BQP7 344 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 ZSWIM1Q9BR11 485 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 TRIM7Q9C029 511 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 POLR1BQ9H9Y6 1135 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 PDE11AQ9HCR9 933 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 FBXL17Q9UF56 701 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 CDH7Q9ULB5 785 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 SHOC2Q9UQ13 582 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 SCN4AP35499 1836 aa6.13□□□□□ -1.43
MRE11-209ENST00000540013 CCDC195A0A1B0GUA6 201 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CTAGE9A4FU28 777 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 TMEM191CA6NGB0 347 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CCDC188H7C350 402 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 RGS10O43665 173 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 SLC25A17O43808 307 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 ZNF853P0CG23 659 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 MYH3P11055 1940 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 PDHBP11177 359 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 ZNF8P17098 575 aaPredicted RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 CD6P30203 668 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 ALDH1B1P30837 517 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 SSR1P43307 286 aaKnown RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 AVPR1BP47901 424 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CAMLGP49069 296 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 KHKP50053 298 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 MXI1P50539 228 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 PMS2P54278 862 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CASP9P55211 416 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 SATB1Q01826 763 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 KRT17Q04695 432 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 IL11RAQ14626 422 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 ABHD17BQ5VST6 288 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 RNF123Q5XPI4 1314 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 B3GNTL1Q67FW5 361 aaPredicted RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 JADE1Q6IE81 842 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 MTHFD1LQ6UB35 978 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 GBP6Q6ZN66 633 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 ADCK2Q7Z695 626 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CFAP52Q8N1V2 620 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 AMER2Q8N7J2 671 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 PI4KAP1Q8N8J0 262 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 IQUBQ8NA54 791 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 TMIEQ8NEW7 156 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CCDC110Q8TBZ0 833 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 BPIFB1Q8TDL5 484 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 RNFT2Q96EX2 444 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 KLHL15Q96M94 604 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 RUFY1Q96T51 708 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 POLR3CQ9BUI4 534 aaPredicted RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 UTP14AQ9BVJ6 771 aaKnown RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 TEX101Q9BY14 249 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 WDR11Q9BZH6 1224 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 FBRSL1Q9HCM7 1045 aaKnown RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 SERINC1Q9NRX5 453 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 SLC35D1Q9NTN3 355 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 CYP39A1Q9NYL5 469 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 AIPL1Q9NZN9 384 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 DKK2Q9UBU2 259 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 DBF4Q9UBU7 674 aaPredicted RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 NENFQ9UMX5 172 aa6.12□□□□□ -1.43
MRE11-209ENST00000540013 RPH3AQ9Y2J0 694 aaPredicted RBP6.12□□□□□ -1.43
MRE11-209ENST00000540013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.12□□□□□ -1.43
MRE11-209ENST00000540013 DDX60Q8IY21 1712 aaKnown RBP6.11□□□□□ -1.43
MRE11-209ENST00000540013 PRAMEF33A0A0G2JMD5 474 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms