RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 FGFR1OP2Q9NVK5 253 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 ELOVL2Q9NXB9 296 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 DENND4AQ7Z401 1863 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 A0A087X1B8 175 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 TBX10O75333 385 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 APOA4P06727 396 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 LAMP2P13473 410 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 CTPS1P17812 591 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 PSMC3P17980 439 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 ST8SIA6P61647 398 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 POLR2LP62875 67 aaKnown RBP16.85■□□□□ 0.29
COPS3-212ENST00000539941 PTPRNQ16849 979 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 AARS2Q5JTZ9 985 aaKnown RBP16.85■□□□□ 0.29
COPS3-212ENST00000539941 BRAT1Q6PJG6 821 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 RAPH1Q70E73 1250 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 USP45Q70EL2 814 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 LYSMD3Q7Z3D4 306 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 PIGWQ7Z7B1 504 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 ACVR1CQ8NER5 493 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 CYB5D2Q8WUJ1 264 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 CCT6BQ92526 530 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 SMIM14Q96QK8 99 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 MCCC1Q96RQ3 725 aaPredicted RBP16.85■□□□□ 0.29
COPS3-212ENST00000539941 OMDQ99983 421 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 OSBPL1AQ9BXW6 950 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 MANSC1Q9H8J5 431 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 ZFYVE1Q9HBF4 777 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 SIRPGQ9P1W8 387 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 MID2Q9UJV3 735 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 EMCNQ9ULC0 261 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 ACOT9Q9Y305 439 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 KIAA1549LQ6ZVL6 1849 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.85■□□□□ 0.29
COPS3-212ENST00000539941 BNIP3LO60238 219 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 ECI2O75521 394 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 PROCP04070 461 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 BPGMP07738 259 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 ALPIP09923 528 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 SLC35E2BP0CK96 405 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 CCND1P24385 295 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 NFKBIAP25963 317 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 PMLP29590 882 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 HNF1BP35680 557 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 EIF2DP41214 584 aaKnown RBP16.85■□□□□ 0.29
COPS3-212ENST00000539941 TAS2R39P59534 338 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 RUNX3Q13761 415 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 COL19A1Q14993 1142 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 FAM45BPQ6NSW5 357 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 GDPD4Q6W3E5 623 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 CCDC63Q8NA47 563 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 FAM45AQ8TCE6 357 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 HCAR2Q8TDS4 363 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 SCRN2Q96FV2 425 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 FKBPLQ9UIM3 349 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 PLA2G4CQ9UP65 541 aa16.85■□□□□ 0.29
COPS3-212ENST00000539941 C1orf232A0A0U1RR37 186 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 TSPAN11A1L157 253 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 WDR91A4D1P6 747 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 OTOL1A6NHN0 477 aaPredicted RBP16.84■□□□□ 0.29
COPS3-212ENST00000539941 TTC34A8MYJ7 566 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 TOP3BO95985 862 aaKnown RBP16.84■□□□□ 0.29
COPS3-212ENST00000539941 IL1BP01584 269 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 SLC4A1P02730 911 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 UGT2B4P06133 528 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 MC4RP32245 332 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 TTPAP49638 278 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 PTPN5P54829 565 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 CDKN3Q16667 212 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 TSNAXIP1Q2TAA8 658 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 ZNF789Q5FWF6 425 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 HECTD2Q5U5R9 776 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 ATG16L1Q676U5 607 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 TPRG1Q6ZUI0 275 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 ZSWIM9Q86XI8 627 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 NUDCD3Q8IVD9 361 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 CBARPQ8N350 705 aaPredicted RBP16.84■□□□□ 0.29
COPS3-212ENST00000539941 CHST14Q8NCH0 376 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 ZFAND2BQ8WV99 257 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 SORCS1Q8WY21 1168 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 NECTIN4Q96NY8 510 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 C1QTNF1Q9BXJ1 281 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 PITPNM3Q9BZ71 974 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 CLDND1Q9NY35 253 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 TMEM216Q9P0N5 145 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 VWA7Q9Y334 891 aa16.84■□□□□ 0.29
COPS3-212ENST00000539941 COL4A3Q01955 1670 aa16.83■□□□□ 0.29
COPS3-212ENST00000539941 CCT8L1PA6NM43 557 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 PHGDHO43175 533 aaKnown RBP16.83■□□□□ 0.28
COPS3-212ENST00000539941 EDF1O60869 148 aaKnown RBP16.83■□□□□ 0.28
COPS3-212ENST00000539941 SAT1P21673 171 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 SLC26A3P40879 764 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 SLC6A11P48066 632 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 KPNA2P52292 529 aaKnown RBP16.83■□□□□ 0.28
COPS3-212ENST00000539941 XIAPP98170 497 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 CACNG1Q06432 222 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 PEX6Q13608 980 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 BLMHQ13867 455 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 SEMA3AQ14563 771 aa16.83■□□□□ 0.28
COPS3-212ENST00000539941 RBM20Q5T481 1227 aaKnown RBP16.83■□□□□ 0.28
COPS3-212ENST00000539941 SLC30A9Q6PML9 568 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms