RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
CACNB4-210ENST00000539935 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
CACNB4-210ENST00000539935 OR2L8Q8NGY9 312 aa12.82□□□□□ -0.36
CACNB4-210ENST00000539935 TCEAL3Q969E4 200 aa12.82□□□□□ -0.36
CACNB4-210ENST00000539935 MAT2BQ9NZL9 334 aa12.82□□□□□ -0.36
CACNB4-210ENST00000539935 A0A075B6Q4 140 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 ANPEPP15144 967 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 TMPRSS11AQ6ZMR5 421 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 DNAAF5Q86Y56 855 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 TBC1D10AQ9BXI6 508 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 PLEKHA1Q9HB21 404 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 ITGAVP06756 1048 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 RARRES1P49788 294 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 CDH4P55283 916 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 SOX10P56693 466 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 PLET1Q6UQ28 207 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 CCSER2Q9H7U1 834 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 OAS3Q9Y6K5 1087 aaKnown RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 C1QTNF3-AMACRE9PGA6 284 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 CHST10O43529 356 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 RTL4Q6ZR62 310 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 TSPAN18Q96SJ8 248 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 FBXO6Q9NRD1 293 aaPredicted RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 TMEM39AQ9NV64 488 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 YTHDF3Q7Z739 585 aaKnown RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 TSEN15Q8WW01 171 aaKnown RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 MBOAT7Q96N66 472 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 DNAJC11Q9NVH1 559 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 ZNF639Q9UID6 485 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 ABCG2Q9UNQ0 655 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 RAP2CQ9Y3L5 183 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 CACNA1FO60840 1977 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 MANFP55145 182 aaKnown RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 PPATQ06203 517 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 MFSD10Q14728 455 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 TCF12Q99081 682 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 MID1O15344 667 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 AFF1P51825 1210 aaKnown RBP12.81□□□□□ -0.36
CACNB4-210ENST00000539935 GRHL2Q6ISB3 625 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 RASAL3Q86YV0 1011 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 ZYG11BQ9C0D3 744 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 SP140LQ9H930 580 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 EXD2Q9NVH0 621 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 UPB1Q9UBR1 384 aa12.81□□□□□ -0.36
CACNB4-210ENST00000539935 L7N2F9 121 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 SCN2BO60939 215 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 MLLT6P55198 1093 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 VAMP2P63027 116 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ILF3Q12906 894 aaKnown RBP eCLIP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 SLC9A4Q6AI14 798 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 CES5AQ6NT32 575 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 C12orf56Q8IXR9 622 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ZNF563Q8TA94 476 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 H0Y858 1186 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 H3BM21 787 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 HSD17B2P37059 387 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 RFTN2Q52LD8 501 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 PLK4O00444 970 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 FOLH1Q04609 750 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 PRR23CQ6ZRP0 262 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 GIPC3Q8TF64 312 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 BRD9Q9H8M2 597 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ZNF221Q9UK13 617 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 PRPF19Q9UMS4 504 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 MRPS33Q9Y291 106 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 HDAC3O15379 428 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 CYP4B1P13584 511 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 CRADDP78560 199 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 UBAP2LQ14157 1087 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 RHEBQ15382 184 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 PDK4Q16654 411 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ZNF433Q8N7K0 673 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 MCFD2Q8NI22 146 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 BAP1Q92560 729 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 HBS1LQ9Y450 684 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 SAGE2PA6NJ88 616 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 SDC2P34741 201 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 CHKAP35790 457 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 MC1RQ01726 317 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ERMAPQ96PL5 475 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ZMPSTE24O75844 475 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 OGNP20774 298 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ROR2Q01974 943 aaKnown RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 SCGB2A2Q13296 93 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 NIPA1Q7RTP0 329 aa12.8□□□□□ -0.36
CACNB4-210ENST00000539935 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
CACNB4-210ENST00000539935 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms