RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ELAC2Q9BQ52 826 aaKnown RBP12.61□□□□□ -0.39
DDX55-206ENST00000539934 ZSWIM1Q9BR11 485 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 BCL2L14Q9BZR8 327 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 RHBGQ9H310 441 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX55-206ENST00000539934 CLDND1Q9NY35 253 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 TMEM59LQ9UK28 342 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 TRPV2Q9Y5S1 764 aa12.61□□□□□ -0.39
DDX55-206ENST00000539934 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 TRAV20A0A0B4J274 112 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CCDC188H7C350 402 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 PLOD3O60568 738 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 SOCS5O75159 536 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 FGGP02679 453 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 TTKP33981 857 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 IRS1P35568 1242 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 DLX2Q07687 328 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 VAC14Q08AM6 782 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 ZNF211Q13398 564 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 OXA1LQ15070 435 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 NANOGP8Q6NSW7 305 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 COMTD1Q86VU5 262 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 TMEM130Q8N3G9 435 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 OR52N1Q8NH53 320 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MCOLN3Q8TDD5 553 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 TANKQ92844 425 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CDK5RAP1Q96SZ6 601 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 HPF1Q9NWY4 346 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 DPP3Q9NY33 737 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 HMX3A6NHT5 357 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CAPN9O14815 690 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 SERPINI2O75830 405 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 OR7A10O76100 309 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MYO1DO94832 1006 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 HEXIM1O94992 359 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 APOC1P02654 83 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CD19P15391 556 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 HOXA11P31270 313 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 SERPINB5P36952 375 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 RPIAP49247 311 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CHN2P52757 468 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 YARSP54577 528 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 XIAPP98170 497 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 ZP2Q05996 745 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MED21Q13503 144 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 IKBKEQ14164 716 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CYP2A13Q16696 494 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MINDY4Q4G0A6 757 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 BRMS1LQ5PSV4 323 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 PHF13Q86YI8 300 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 DBF4BQ8NFT6 615 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 ALG3Q92685 438 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 KRT35Q92764 455 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 HPDLQ96IR7 371 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 BBS4Q96RK4 519 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 BCL7BQ9BQE9 202 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MROQ9BYG7 248 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 SACM1LQ9NTJ5 587 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 FAM86C1Q9NVL1 165 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 RSL24D1Q9UHA3 163 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 PIN4Q9Y237 131 aaKnown RBP12.6□□□□□ -0.39
DDX55-206ENST00000539934 ACOT9Q9Y305 439 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 MAU2Q9Y6X3 613 aa12.6□□□□□ -0.39
DDX55-206ENST00000539934 CACNA1AO00555 2505 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 PRR5-ARHGAP8B1AHC4 643 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 MARCKSL1P49006 195 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 CDH8P55286 799 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 RBP5P82980 135 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 ATP1A4Q13733 1029 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 PM20D1Q6GTS8 502 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 LPCAT1Q8NF37 534 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 PHF21AQ96BD5 680 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 DEPDC7Q96QD5 511 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 KLC2Q9H0B6 622 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 SMYD3Q9H7B4 428 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 VRTNQ9H8Y1 702 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 ACTR3BQ9P1U1 418 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
DDX55-206ENST00000539934 PADI4Q9UM07 663 aa12.59□□□□□ -0.39
DDX55-206ENST00000539934 TXNDC9O14530 226 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 ENTPD5O75356 428 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.39
DDX55-206ENST00000539934 ITIH1P19827 911 aa12.58□□□□□ -0.39
DDX55-206ENST00000539934 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms