RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 UMODL1-AS1Q8N2C9 162 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 DHRSXQ8N5I4 330 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 SMYD1Q8NB12 490 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 RHEBL1Q8TAI7 183 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 TMEM125Q96AQ2 219 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 GAD1Q99259 594 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 TRIM54Q9BYV2 358 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 TUBB1Q9H4B7 451 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 POPDC3Q9HBV1 291 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 NT5MQ9NPB1 228 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 RGS18Q9NS28 235 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MPP6Q9NZW5 540 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MARCH4Q9P2E8 410 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 GIMAP2Q9UG22 337 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 OAZ3Q9UMX2 235 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 CDC14AQ9UNH5 594 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 PATJQ8NI35 1801 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 PTPRDP23468 1912 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 A0A1W2PP18 115 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TCRBV5S2A0A599 114 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ZSCAN9O15535 394 aaPredicted RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 SEC24DO94855 1032 aaPredicted RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 ATE1O95260 518 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 MMP2P08253 660 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 MTHFD2P13995 350 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 OXTRP30559 389 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 RFC2P35250 354 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 CD86P42081 329 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 GSK3BP49841 420 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SUOXP51687 545 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 AFF1P51825 1210 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 ACVR1Q04771 509 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 GRSF1Q12849 480 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDH13-204ENST00000539548 C16orf72Q14CZ0 275 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 RPS6KA2Q15349 733 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 FSCN1Q16658 493 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 OGFOD2Q6N063 350 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ZNF549Q6P9A3 640 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SPATA19Q7Z5L4 167 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 GPR142Q7Z601 462 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 PIM3Q86V86 326 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ZNF354CQ86Y25 554 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TBC1D21Q8IYX1 336 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 OR52K2Q8NGK3 314 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 GPR150Q8NGU9 434 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SCAMP5Q8TAC9 235 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SH3RF2Q8TEC5 729 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 CYGBQ8WWM9 190 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 CASP10Q92851 521 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 CNDP2Q96KP4 475 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 C1orf74Q96LT6 269 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 PLEKHG4BQ96PX9 1271 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 PKMYT1Q99640 499 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TUBA1CQ9BQE3 449 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TFB2MQ9H5Q4 396 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 RPF2Q9H7B2 306 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 SMPD3Q9NY59 655 aaPredicted RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 ZNF639Q9UID6 485 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 DSEQ9UL01 958 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 GPR45Q9Y5Y3 372 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 PTGDR2Q9Y5Y4 395 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 HS3ST4Q9Y661 456 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 H3BMQ9 156 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 PDHXO00330 501 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 GIPC1O14908 333 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 MSI1O43347 362 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 LDB2O43679 373 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TPST1O60507 370 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SIX3O95343 332 aaPredicted RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 HNRNPCP07910 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDH13-204ENST00000539548 SLC2A3P11169 496 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ODC1P11926 461 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 HGFP14210 728 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 RPS9P46781 194 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 FOXA1P55317 472 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 EEFSECP57772 596 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 YBX1P67809 324 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 TNK2Q07912 1038 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ITKQ08881 620 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 IHHQ14623 411 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 RAB39AQ14964 217 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 OR4D1Q15615 310 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 UPP1Q16831 310 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 CYP51A1Q16850 503 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ZNF829Q3KNS6 432 aaPredicted RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 CYBRD1Q53TN4 286 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SIRPB2Q5JXA9 342 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 MARC1Q5VT66 337 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 USP51Q70EK9 711 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 METTL23Q86XA0 190 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 DDIASQ8IXT1 998 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TADA1Q96BN2 335 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TUBGCP3Q96CW5 907 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 THAP11Q96EK4 314 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 FBXL20Q96IG2 436 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 COG8Q96MW5 612 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ATOH8Q96SQ7 321 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SEZ6LQ9BYH1 1024 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 TMLHEQ9NVH6 421 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms