RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 XPR1Q9UBH6 696 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TOPAZ1Q8N9V7 1692 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 A0A1W2PQ67 120 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 C5orf60A6NFR6 353 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PRR23D1E9PI22 279 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 FCHO1O14526 889 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SLC28A2O43868 658 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PRMT3O60678 531 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MATN4O95460 622 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ASLP04424 464 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PRR23D2P0DMB1 279 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 MYBL2P10244 700 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 NT5EP21589 574 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 IFNGR2P38484 337 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SLC20A2Q08357 652 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FBXO48Q5FWF7 155 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 GCNT7Q6ZNI0 430 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CMC1Q7Z7K0 106 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 Q8N9G6 341 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 SIDT2Q8NBJ9 832 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 FBXO15Q8NCQ5 510 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 CLHC1Q8NHS4 586 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ZNF563Q8TA94 476 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ANKRD7Q92527 254 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CLP1Q92989 425 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 DEPDC7Q96QD5 511 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 GPR21Q99679 349 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TMEM245Q9H330 911 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CYLDQ9NQC7 956 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SUCOQ9UBS9 1254 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 MRPS33Q9Y291 106 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 PCDHB1Q9Y5F3 818 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FAM155BO75949 473 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PDE5AO76074 875 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SOD2P04179 222 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 IQCF3P0C7M6 154 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 HOXB2P14652 356 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 L1CAMP32004 1257 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MPP1Q00013 466 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 IL10RBQ08334 325 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 NAE1Q13564 534 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 NCF4Q15080 339 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SNX30Q5VWJ9 437 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TAPT1Q6NXT6 567 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 C10orf107Q8IVU9 208 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PLD5Q8N7P1 536 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 LEMD2Q8NC56 503 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 DNAJC9Q8WXX5 260 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PPCDCQ96CD2 204 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 THAP11Q96EK4 314 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PPP3R2Q96LZ3 170 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TBATAQ96M53 351 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 L2HGDHQ9H9P8 463 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TDP1Q9NUW8 608 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SPATA6Q9NWH7 488 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 ZNF490Q9ULM2 529 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 M0R3G1 203 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 OR1F1O43749 312 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 TNFP01375 233 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 FOSL2P15408 326 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 SERPINB3P29508 390 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 PKNOX1P55347 436 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ATP6V0D1P61421 351 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CCNYL2Q5T2Q4 361 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 SYPL2Q5VXT5 272 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 TMEM154Q6P9G4 183 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 GDPD4Q6W3E5 623 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF567Q8N184 647 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ART4Q93070 314 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 PMEPA1Q969W9 287 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 FBXL18Q96ME1 805 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 FUT8Q9BYC5 575 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 CARS2Q9HA77 564 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 TMEM216Q9P0N5 145 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 FKBPLQ9UIM3 349 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 PRMT5O14744 637 aaPredicted RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 PKMP14618 531 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 NQO1P15559 274 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 PAICSP22234 425 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 JAK1P23458 1154 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 RPL4P36578 427 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 KCNQ1P51787 676 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 AP1S1P61966 158 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZNF155Q12901 538 aaPredicted RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 MRPL28Q13084 256 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 AAK1Q2M2I8 961 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ANO7Q6IWH7 933 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 SIAH1Q8IUQ4 282 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 TMEM237Q96Q45 408 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 RCOR3Q9P2K3 495 aaPredicted RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 NUP188Q5SRE5 1749 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 LEFTY2O00292 366 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 RGS5O15539 181 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 ERN1O75460 977 aaKnown RBP5.34□□□□□ -1.55
LRP6-203ENST00000538239 ZMPSTE24O75844 475 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 APOA1P02647 267 aa5.34□□□□□ -1.55
LRP6-203ENST00000538239 TYRP14679 529 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms