RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 EPHA3P29320 983 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 CTSKP43235 329 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 FOLH1Q04609 750 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 CNSTQ6PJW8 725 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 SCIMPQ6UWF3 145 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 PIGZQ86VD9 579 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 TCAIMQ8N3R3 496 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 C11orf24Q96F05 449 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 NDNQ99608 321 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 PORCNQ9H237 461 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 NKIRAS2Q9NYR9 191 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 PACSIN3Q9UKS6 424 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 TFECO14948 347 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 UGT2B11O75310 529 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 RSL1D1O76021 490 aaKnown RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 GIMD1P0DJR0 217 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 KELP23276 732 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 IGFALSP35858 605 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 RPS6KA3P51812 740 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 RPL19P84098 196 aaKnown RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 PCBP1Q15365 356 aaKnown RBP eCLIP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 KCNA10Q16322 511 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 EGFL6Q8IUX8 553 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 LEMD2Q8NC56 503 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 DHRS7Q9Y394 339 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 CLUHO75153 1309 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 RGL2O15211 777 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 APOC1P02654 83 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 NUDT17P0C025 328 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 MANFP55145 182 aaKnown RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 ABRQ12979 859 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 TIGD2Q4W5G0 525 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 ERICH5Q6P6B1 374 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 SLC30A10Q6XR72 485 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 FAR1Q8WVX9 515 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 GPER1Q99527 375 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 RHOBTB2Q9BYZ6 727 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 EURLQ9NYK6 297 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 HMGXB4Q9UGU5 601 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 DMTF1Q9Y222 760 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 VWA7Q9Y334 891 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 OAS3Q9Y6K5 1087 aaKnown RBP10.63□□□□□ -0.71
CLIP1-209ENST00000537178 SPATA31A1Q5TZJ5 1347 aa10.63□□□□□ -0.71
CLIP1-209ENST00000537178 ATP6AP2A0A1C7CYW4 349 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ATP6AP2O75787 350 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 IL1R1P14778 569 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SSR2P43308 183 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ANKRD52Q8NB46 1076 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 LENG1Q96BZ8 264 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SLC47A1Q96FL8 570 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 RAB23Q9ULC3 237 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 REXO2Q9Y3B8 237 aaKnown RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 MRPS23Q9Y3D9 190 aaKnown RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 GRIP1Q9Y3R0 1128 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ADORA2AP29274 412 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 GPD2P43304 727 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SCNN1GP51170 649 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 CDH4P55283 916 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ITGB3BPQ13352 177 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 DPYSQ14117 519 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SLC5A9Q2M3M2 681 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 PPP1R15BQ5SWA1 713 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 NPNTQ6UXI9 565 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ADCY4Q8NFM4 1077 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 OR52K2Q8NGK3 314 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 HM13Q8TCT9 377 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 HELQQ8TDG4 1101 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ADAMTS15Q8TE58 950 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 C5orf34Q96MH7 638 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 CDADC1Q9BWV3 514 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 DKK3Q9UBP4 350 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 IKZF2Q9UKS7 526 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 FADS3Q9Y5Q0 445 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 G3V2T6 193 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 CCNDBP1O95273 360 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 METTL18O95568 372 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SDC2P34741 201 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 KCNJ2P63252 427 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 DLG4P78352 724 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SRSF11Q05519 484 aaKnown RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ENPEPQ07075 957 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 ACVR2BQ13705 512 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 NPY5RQ15761 445 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 TTMPQ5BVD1 217 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 CPTPQ5TA50 214 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 OLFML1Q6UWY5 402 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 SNX20Q7Z614 316 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 PARGQ86W56 976 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 LINGO1Q96FE5 620 aa10.62□□□□□ -0.71
CLIP1-209ENST00000537178 TDRD1Q9BXT4 1180 aaKnown RBP10.62□□□□□ -0.71
CLIP1-209ENST00000537178 BLOC1S4Q9NUP1 217 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms