RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TMTC1Q8IUR5 882 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 PCDH20Q8N6Y1 951 aaKnown RBP4.77□□□□□ -1.65
CCDC7-208ENST00000537047 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 PIGTQ969N2 578 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 NEUROD6Q96NK8 337 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 TFB2MQ9H5Q4 396 aaKnown RBP4.77□□□□□ -1.65
CCDC7-208ENST00000537047 UPF2Q9HAU5 1272 aaKnown RBP4.77□□□□□ -1.65
CCDC7-208ENST00000537047 SLC52A3Q9NQ40 469 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 C20orf141Q9NUB4 165 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 PADI3Q9ULW8 664 aa4.77□□□□□ -1.65
CCDC7-208ENST00000537047 FTCDO95954 541 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 CD48P09326 243 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 RRM1P23921 792 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 SLC12A1Q13621 1099 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 KRT24Q2M2I5 525 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 CCNYL2Q5T2Q4 361 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 ANO1Q5XXA6 986 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 OR7E24Q6IFN5 339 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 HAPLN4Q86UW8 402 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 STPG4Q8N801 248 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 USP38Q8NB14 1042 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 ACVR1CQ8NER5 493 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 TRIM58Q8NG06 486 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 OR5R1Q8NH85 324 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 FCAMRQ8WWV6 532 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 ATOH8Q96SQ7 321 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 FKRPQ9H9S5 495 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 ACSL5Q9ULC5 683 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 KIAA1210Q9ULL0 1709 aa4.76□□□□□ -1.65
CCDC7-208ENST00000537047 TTC7AQ9ULT0 858 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-208ENST00000537047 CACNA1FO60840 1977 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 TEX22C9J3V5 150 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 HHLA1C9JL84 531 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 CIDEAO60543 219 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 IGHV4-39P01824 125 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 TFP02787 698 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 RNPS1Q15287 305 aaKnown RBP4.75□□□□□ -1.65
CCDC7-208ENST00000537047 WDR45BQ5MNZ6 344 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 TXNDC8Q6A555 127 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 FAM53AQ6NSI3 398 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-208ENST00000537047 TMEM81Q6P7N7 255 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 CPLX2Q6PUV4 134 aaKnown RBP4.75□□□□□ -1.65
CCDC7-208ENST00000537047 QSOX2Q6ZRP7 698 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 APLFQ8IW19 511 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-208ENST00000537047 SLC38A5Q8WUX1 472 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 TM9SF4Q92544 642 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 PABPC5Q96DU9 382 aaKnown RBP4.75□□□□□ -1.65
CCDC7-208ENST00000537047 LINGO1Q96FE5 620 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 LRR1Q96L50 414 aa4.75□□□□□ -1.65
CCDC7-208ENST00000537047 SEBOXQ9HB31 216 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-208ENST00000537047 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 NR5A2O00482 541 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 ZNHIT1O43257 154 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 PCDH7O60245 1069 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 ZNF821O75541 412 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-208ENST00000537047 MMP14P50281 582 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 LMO4P61968 165 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 RUNX1T1Q06455 604 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 UBE4AQ14139 1066 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 METTL2BQ6P1Q9 378 aaKnown RBP4.74□□□□□ -1.65
CCDC7-208ENST00000537047 TNIP2Q8NFZ5 429 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 TBC1D20Q96BZ9 403 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 ORAI1Q96D31 301 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 STAMBPL1Q96FJ0 436 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 METTL2AQ96IZ6 378 aaKnown RBP4.74□□□□□ -1.65
CCDC7-208ENST00000537047 MPHOSPH6Q99547 160 aaKnown RBP4.74□□□□□ -1.65
CCDC7-208ENST00000537047 PYGO2Q9BRQ0 406 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 DCTN5Q9BTE1 182 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 MAP3K20Q9NYL2 800 aaKnown RBP4.74□□□□□ -1.65
CCDC7-208ENST00000537047 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
CCDC7-208ENST00000537047 PRSS56P0CW18 603 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 ERVK-10P10266 1014 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 ZNF10P21506 573 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-208ENST00000537047 RAD23BP54727 409 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 NAE1Q13564 534 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 MORC3Q14149 939 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 BRD3Q15059 726 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 SLC22A25Q6T423 547 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 SH3GL2Q99962 352 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 PLEKHA4Q9H4M7 779 aa4.73□□□□□ -1.65
CCDC7-208ENST00000537047 PTPRCP08575 1304 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 hCG_1642624A0A1W2PR95 340 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 PRKNO60260 465 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 GNB3P16520 340 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 DDX5P17844 614 aaKnown RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 POLR2CP19387 275 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 TRAPPC10P48553 1259 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 CLK1P49759 484 aaKnown RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 TERF1P54274 439 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 EEF1A1P68104 462 aaKnown RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 ZNF766Q5HY98 468 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 EEF1A1P5Q5VTE0 462 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 TRPT1Q86TN4 253 aaKnown RBP4.72□□□□□ -1.65
CCDC7-208ENST00000537047 GTSCR1Q86UQ5 136 aa4.72□□□□□ -1.65
CCDC7-208ENST00000537047 BEST3Q8N1M1 668 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms