RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CDR2LQ86X02 465 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 FAM131BQ86XD5 332 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ARMC8Q8IUR7 673 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SLC22A9Q8IVM8 553 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SPNS2Q8IVW8 549 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 DENND6AQ8IWF6 608 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 HOMEZQ8IX15 550 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 DEFB106AQ8N104 65 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 CRYBG2Q8N1P7 616 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 LINC01465Q8N7H1 131 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 MAGEE2Q8TD90 523 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 FAR1Q8WVX9 515 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SEPT1Q8WYJ6 367 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 NTAN1Q96AB6 310 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 AURKBQ96GD4 344 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF486Q96H40 463 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 HSFY1Q96LI6 401 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TEKT5Q96M29 485 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TEPSINQ96N21 525 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SLC2A13Q96QE2 648 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF300Q96RE9 604 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-215ENST00000536145 YME1L1Q96TA2 773 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 VAT1Q99536 393 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 LPIN3Q9BQK8 851 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 NACA2Q9H009 215 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 AKTIPQ9H8T0 292 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 ANKHQ9HCJ1 492 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 NECTIN3Q9NQS3 549 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 SEPT10Q9P0V9 454 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 EGFL7Q9UHF1 273 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 UGT2A1Q9Y4X1 527 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 TIMM22Q9Y584 194 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 GPR45Q9Y5Y3 372 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 DGKBQ9Y6T7 804 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 BRWD3Q6RI45 1802 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 PLXNA1Q9UIW2 1896 aa6.92□□□□□ -1.3
CPSF7-215ENST00000536145 CROCCQ5TZA2 2017 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 COL4A5P29400 1685 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 ISPDA4D126 451 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 PABPN1LA6NDY0 278 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 GRXCR2A6NFK2 248 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 C16orf96A6NNT2 1141 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 ZNF99A8MXY4 864 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CENPBD1B2RD01 187 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 FAM72CH0Y354 149 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 I6L893 689 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 M0QX08 132 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 AREL1O15033 823 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 NCAM2O15394 837 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 NDUFS2O75306 463 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CDK14O94921 469 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 INMTO95050 263 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 KCNK2O95069 426 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CHRNA1P02708 482 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 RBP1P09455 135 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 LTA4HP09960 611 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 IQCF3P0C7M6 154 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TCF3P15923 654 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 IL7RP16871 459 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CHRM3P20309 590 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TCEA1P23193 301 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 BDNFP23560 247 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 GRK3P35626 688 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CASP3P42574 277 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 SULT1E1P49888 294 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 APLP1P51693 650 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 PPP5CP53041 499 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 BCAT1P54687 386 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TPTEP56180 551 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 STX1BP61266 288 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 PPP2R2BQ00005 443 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 EMX2Q04743 252 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CLCQ05315 142 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 LIPEQ05469 1076 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CD47Q08722 323 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 BST2Q10589 180 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CDH17Q12864 832 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 ILF2Q12905 390 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 FADDQ13158 208 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 GRB7Q14451 532 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TMEM132DQ14C87 1099 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TMEM132BQ14DG7 1078 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 POLD3Q15054 466 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 STXBP2Q15833 593 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 ZBTB6Q15916 424 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 FSCN1Q16658 493 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 KYAT1Q16773 422 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CYP51A1Q16850 503 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 VPS26BQ4G0F5 336 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 CATSPEREQ5SY80 951 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 RBM20Q5T481 1227 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 ATAD3BQ5T9A4 648 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 FAM72AQ5TYM5 149 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TTC23Q5W5X9 447 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 NAPEPLDQ6IQ20 393 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 FAM72DQ6L9T8 149 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 ESRP1Q6NXG1 681 aaKnown RBP6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TAF2Q6P1X5 1199 aa6.91□□□□□ -1.3
CPSF7-215ENST00000536145 TMEM207Q6UWW9 146 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms