RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NOD2Q9HC29 1040 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 MRPL47Q9HD33 250 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 SARS2Q9NP81 518 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 FBXO8Q9NRD0 319 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 PILRAQ9UKJ1 303 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 SUFUQ9UMX1 484 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 TEX15Q9BXT5 2789 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 ZFC3H1O60293 1989 aaKnown RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 A6NCN8 305 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 NPIPB15A6NHN6 443 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 ARHGAP6O43182 974 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 ECEL1O95672 775 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 RECKO95980 971 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 FTLP02792 175 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 PRKCGP05129 697 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 ANKRD34CP0C6C1 535 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 CCL4P13236 92 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 KRT10P13645 584 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 TNFAIP3P21580 790 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 IL4RP24394 825 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 IL1R2P27930 398 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 SERPINB6P35237 376 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 UGT1A3P35503 534 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 ETV3P41162 512 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 ATP1A2P50993 1020 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 EPHA4P54764 986 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 OR1D5P58170 312 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 PTSQ03393 145 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 TRAF2Q12933 501 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 MAP7Q14244 749 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 PIGHQ14442 188 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 Q6ZVL8 140 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 USP45Q70EL2 814 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 HSD11B1LQ7Z5J1 315 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 Q8N9G6 341 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 AVL9Q8NBF6 648 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 SYN2Q92777 582 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 CSPG4P5Q96PW8 444 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 NUDT22Q9BRQ3 303 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 RMI1Q9H9A7 625 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 UCK1Q9HA47 277 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 RDH14Q9HBH5 336 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 GPATCH2LQ9NWQ4 482 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 TMEM184BQ9Y519 407 aaPredicted RBP11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 PCDHGC4Q9Y5F7 938 aa11.17□□□□□ -0.62
CLSTN3-206ENST00000535668 A0A0J9YYE9 177 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 PRR19A6NJB7 356 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 RHPN2P1A8MT19 583 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 B4DGG1 531 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 GPR89AB7ZAQ6 455 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 H3BRJ5 948 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 DFFAO00273 331 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 DDX3XO00571 662 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 TOX3O15405 576 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 DAPK3O43293 454 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 CPP00450 1065 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 TRBC1P01850 177 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 GPR89BP0CG08 455 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 MAZP56270 477 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 MC2RQ01718 297 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 NFATC3Q12968 1075 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 SRSF6Q13247 344 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 ZNF235Q14590 738 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 STX1AQ16623 288 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 MAP9Q49MG5 647 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 MARC1Q5VT66 337 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 BORAQ6PGQ7 559 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 TMCO3Q6UWJ1 677 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 ZNF571Q7Z3V5 609 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 TP53INP2Q8IXH6 220 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 NDUFAF2Q8N183 169 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 EXD1Q8NHP7 514 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 CCDC74BQ96LY2 380 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 EFHD1Q9BUP0 239 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 TRIM7Q9C029 511 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 TRIT1Q9H3H1 467 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 NFKBIL1Q9UBC1 381 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 PCSK1NQ9UHG2 260 aa11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 HEMK1Q9Y5R4 338 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-206ENST00000535668 FAM170AA1A519 330 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 OR5K4A6NMS3 321 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 DNAJC6O75061 913 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 PRLP01236 227 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 FAM87AP0C7U9 286 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 MAP4P27816 1152 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 CSF2RBP32927 897 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ARL4AP40617 200 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 MMP13P45452 471 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ARSEP51690 589 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 STC1P52823 247 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 SLC25A11Q02978 314 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 CLCA4Q14CN2 919 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 PPP6R3Q5H9R7 873 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 PHF19Q5T6S3 580 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ARMC12Q5T9G4 340 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms