RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TMEM202A6NGA9 273 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 IFNB1P01574 187 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 SLC4A1P02730 911 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 GOLGA6DP0CG33 693 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 KCNA4P22459 653 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 GPR1P46091 355 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 CDK3Q00526 305 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 PPARDQ03181 441 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 SPARCL1Q14515 664 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 HENMT1Q5T8I9 393 aaKnown RBP22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 DENND5AQ6IQ26 1287 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 PRUNE1Q86TP1 453 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 RBFAQ8N0V3 343 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 ATL2Q8NHH9 583 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 TSACCQ96A04 125 aaPredicted RBP22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 FAM83DQ9H4H8 585 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 FGF22Q9HCT0 170 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 PHPT1Q9NRX4 125 aaPredicted RBP22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 KCND1Q9NSA2 647 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 GOLGA6AQ9NYA3 693 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 PCNX2A6NKB5 2137 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 SPAARA0A1B0GVQ0 90 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 H3BM21 787 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 GIMD1P0DJR0 217 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 MYCLP1P12525 358 aaPredicted RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 ETS1P14921 441 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 SRP54P61011 504 aaKnown RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 GNG11P61952 73 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 TAB3Q8N5C8 712 aaPredicted RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 EID2Q8N6I1 236 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 GLIS1Q8NBF1 620 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 ZNF548Q8NEK5 533 aaPredicted RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 OR56A4Q8NGH8 313 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 BTN2A2Q8WVV5 523 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 OR1E3Q8WZA6 343 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 TBATAQ96M53 351 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 TBL1YQ9BQ87 522 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 HOMER3Q9NSC5 361 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 SMARCAL1Q9NZC9 954 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 HACD3Q9P035 362 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 NFKBIL1Q9UBC1 381 aaPredicted RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 KLQ9UEF7 1012 aa22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 APOBEC3BQ9UH17 382 aaKnown RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 TP53BP1Q12888 1972 aaPredicted RBP22.63■■□□□ 1.21
SFSWAP-204ENST00000535399 PDE2AO00408 941 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 CES2O00748 559 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 TNFRSF10CO14798 259 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 USP12O75317 370 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 PYGLP06737 847 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 ZSCAN5DPP0CG00 497 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 KELP23276 732 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 KCNJ1P48048 391 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 HK3P52790 923 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 DCDC1P59894 354 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 MSLNQ13421 630 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 TRIP6Q15654 476 aaKnown RBP22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 ERMP1Q7Z2K6 904 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 GLRX5Q86SX6 157 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 HID1Q8IV36 788 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 GPR26Q8NDV2 337 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 BLOC1S5Q8TDH9 187 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 PDXPQ96GD0 296 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 CDC6Q99741 560 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 FRMD8Q9BZ67 464 aaPredicted RBP22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 ARNT2Q9HBZ2 717 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 SPASTQ9UBP0 616 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 CNOT6Q9ULM6 557 aaKnown RBP22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 DGKBQ9Y6T7 804 aa22.62■■□□□ 1.21
SFSWAP-204ENST00000535399 FADS2P1A8MWK0 482 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 TRIM38O00635 465 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 SCAMP1O15126 338 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 ZNF185O15231 689 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 RASGRP1O95267 797 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 AP2A1O95782 977 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 BPIP17213 487 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 HMGCLP35914 325 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 BLKP51451 505 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 ALS2CLQ60I27 953 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 CCDC89Q8N998 374 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 ACTRT1Q8TDG2 376 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 LMX1AQ8TE12 382 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 COX14Q96I36 57 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 LRRC61Q9BV99 259 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 SLC13A1Q9BZW2 595 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 CDH19Q9H159 772 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 LRRC40Q9H9A6 602 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 ETNK1Q9HBU6 452 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 RAD18Q9NS91 495 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 IL17CQ9P0M4 197 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 CSNK1G3Q9Y6M4 447 aa22.61■■□□□ 1.21
SFSWAP-204ENST00000535399 PGRMC1O00264 195 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 PSMD3O43242 534 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 AQP9O43315 295 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 CEACAM5P06731 702 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 RPL22P35268 128 aaKnown RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 FDFT1P37268 417 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 SIM1P81133 766 aaPredicted RBP22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 C1orf61Q13536 156 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 PRRT3Q5FWE3 981 aa22.6■■□□□ 1.21
SFSWAP-204ENST00000535399 N4BP2L1Q5TBK1 243 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms